RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	HLA-DRB1	P01911	266 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	MAS1L	P35410	378 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	KLRB1	Q12918	225 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	CD200R1L	Q6Q8B3	271 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	ZNF385A	Q96PM9	386 aa	Known RBP	6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	TMEM238L	A0A1B0GVL6	79 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986		A6NJY4	79 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	ZNF729	A6NN14	1252 aa	Predicted RBP	6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	TSPAN2	O60636	221 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	PRSS2	P07478	247 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	CISD3	P0C7P0	127 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	DRD3	P35462	400 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	NUBP1	P53384	320 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	RAC3	P60763	192 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	ARF6	P62330	175 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	EFNB1	P98172	346 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	COL10A1	Q03692	680 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	UNC119	Q13432	240 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	ZNF418	Q8TF45	676 aa	Predicted RBP	6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	GRAMD2B	Q96HH9	432 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	COX14	Q96I36	57 aa		6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	CDX2	Q99626	313 aa	Predicted RBP	6.61	□□□□□ -1.35
CTNND1-223	ENST00000529986	IGHV1OR21-1	A0A087WYE8	117 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	TRBV5-5	A0A0J9YX44	114 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986		A8MXK9	166 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	GPR3	P46089	330 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	FOXA3	P55318	350 aa	Predicted RBP	6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986		Q8WTZ3	238 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	GMPPA	Q96IJ6	420 aa	Predicted RBP	6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	RASL10B	Q96S79	203 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	ALKBH7	Q9BT30	221 aa	Predicted RBP	6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986		J3QT63	122 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	LIMS1	P48059	325 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	ISX	Q2M1V0	245 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	C2orf83	Q53S99	150 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	MMD2	Q8IY49	270 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	AQP3	Q92482	292 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	C10orf35	Q96D05	121 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	KCNS1	Q96KK3	526 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	NCOR1P1	Q9H4R4	102 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	F5	P12259	2224 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	SLC25A17	O43808	307 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	TBX6	O95947	436 aa	Predicted RBP	6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	TGFA	P01135	160 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	COL9A1	P20849	921 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	SRD5A2	P31213	254 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	SRSF3	P84103	164 aa	Known RBP	6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	TMEM177	Q53S58	311 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	LILRA6	Q6PI73	481 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	SELENOH	Q8IZQ5	122 aa	Known RBP	6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	P2RX4	Q99571	388 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	CDC42EP3	Q9UKI2	254 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	HIGD1A	Q9Y241	93 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	KIAA0100	Q14667	2235 aa	Known RBP	6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	UPK3A	O75631	287 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	HPRT1	P00492	218 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	LINC00869	P0C866	280 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	ZNF124	Q15973	351 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	RNFT1	Q5M7Z0	435 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	NIT1	Q86X76	327 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	SFRP2	Q96HF1	295 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	TMUB1	Q9BVT8	246 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986	HSPB7	Q9UBY9	170 aa		6.6	□□□□□ -1.35
CTNND1-223	ENST00000529986		H0Y980	276 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	PGLYRP1	O75594	196 aa	Predicted RBP	6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	WISP3	O95389	354 aa	Predicted RBP	6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	ZNF735	P0CB33	412 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	GZMH	P20718	246 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	RIPPLY3	P57055	190 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	FUT5	Q11128	374 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	OR1L8	Q8NGR8	309 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	GPR35	Q9HC97	309 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	PEF1	Q9UBV8	284 aa	Known RBP	6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986		A6NNC1	897 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	ZG16	O60844	167 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	RAMP1	O60894	148 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	NUDT3	O95989	172 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	ZNF708	P17019	499 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	HCP5	Q6MZN7	132 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	STXBP6	Q8NFX7	210 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	GPBAR1	Q8TDU6	330 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	CEACAM18	A8MTB9	384 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	NPIPB8	E9PQR5	432 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	LINC01387	J3KSC0	135 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	SLC17A3	O00476	420 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	NPIPB7	O75200	414 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	HYPM	O75409	117 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	CLDN14	O95500	239 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	LGALS7	P47929	136 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	C1orf53	Q5VUE5	145 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	GFRAL	Q6UXV0	394 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	SFTPA2	Q8IWL1	248 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	ZNF764	Q96H86	408 aa	Predicted RBP	6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	TBL2	Q9Y4P3	447 aa	Known RBP	6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	AUP1	Q9Y679	476 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	KCNMB2	Q9Y691	235 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	IGHV3-72	A0A0B4J1Y9	119 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986		A0A1W2PQD3	144 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	NDUFS8	O00217	210 aa		6.59	□□□□□ -1.35
CTNND1-223	ENST00000529986	SIPA1L1	O43166	1804 aa		6.59	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms