RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 DCUN1D1Q96GG9 259 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 DERL3Q96Q80 235 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 SIGMAR1Q99720 223 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 HOPXQ9BPY8 73 aaPredicted RBP2.51□□□□□ -2.01
C11orf88-204ENST00000529661 TMEM109Q9BVC6 243 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 TRIM4Q9C037 500 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 DCSTAMPQ9H295 470 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 BOLA2Q9H3K6 86 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 NMNAT1Q9HAN9 279 aaPredicted RBP2.51□□□□□ -2.01
C11orf88-204ENST00000529661 SND1-IT1Q9HBX3 110 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 ARMC1Q9NVT9 282 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 DOK5Q9P104 306 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 RWDD2AQ9UIY3 292 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 VPREB3Q9UKI3 123 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 HHLA2Q9UM44 414 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 CARHSP1Q9Y2V2 147 aaKnown RBP2.51□□□□□ -2.01
C11orf88-204ENST00000529661 PRELID3BQ9Y3B1 194 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 DOCK5Q9H7D0 1870 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 FHAD1B1AJZ9 1412 aa2.51□□□□□ -2.01
C11orf88-204ENST00000529661 THSD7AQ9UPZ6 1657 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 KIF15Q9NS87 1388 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 DICER1Q9UPY3 1922 aaKnown RBP2.5□□□□□ -2.01
C11orf88-204ENST00000529661 ATAD5Q96QE3 1844 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 A0A1B0GV50 99 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 LOC105371267A0A1B0GV96 52 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 GNG14A0A1W2PPG7 69 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.5□□□□□ -2.01
C11orf88-204ENST00000529661 H3BSA7 217 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 OR7C1O76099 320 aaPredicted RBP2.5□□□□□ -2.01
C11orf88-204ENST00000529661 IGHG2P01859 326 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 OR12D1P0DN82 309 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 GTF2F2P13984 249 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 KCNE1P15382 129 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 CD36P16671 472 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 CNTFRP26992 372 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 TMEM267Q0VDI3 215 aaPredicted RBP2.5□□□□□ -2.01
C11orf88-204ENST00000529661 PMAIP1Q13794 54 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 DNLZQ5SXM8 178 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 FAM104BQ5XKR9 115 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 TRIQKQ629K1 86 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 ALKAL1Q6UXT8 129 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 CALHM3Q86XJ0 350 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 PDPNQ86YL7 162 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 DEFB125Q8N687 156 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 ZDHHC22Q8N966 263 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 OR9I1Q8NGQ6 314 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 ZNRF2Q8NHG8 242 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 PYDC1Q8WXC3 89 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 GALMQ96C23 342 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 ACY3Q96HD9 319 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 DIRAS2Q96HU8 199 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 ANKRD36BP1Q96IX9 119 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 DDA1Q9BW61 102 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 C19orf12Q9NSK7 152 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 BTRCQ9Y297 605 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 ZNF706Q9Y5V0 76 aaPredicted RBP2.5□□□□□ -2.01
C11orf88-204ENST00000529661 GRIN2BQ13224 1484 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 PIK3C2GO75747 1445 aa2.5□□□□□ -2.01
C11orf88-204ENST00000529661 IGHV1-45A0A0A0MS14 117 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 TRAV8-1A0A0A6YYK1 113 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 GMNCA6NCL1 334 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 ZNF98A6NK75 572 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 EEF1E1-BLOC1S5C9J1V9 151 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 K7EQS6 105 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 EEF1E1O43324 174 aaKnown RBP2.49□□□□□ -2.01
C11orf88-204ENST00000529661 POP7O75817 140 aaKnown RBP2.49□□□□□ -2.01
C11orf88-204ENST00000529661 TTRP02766 147 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 CRYGDP07320 174 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 PSMB3P49720 205 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 ZNF83P51522 516 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 SNAP25P60880 206 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 PSME3P61289 254 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 TFAMQ00059 246 aaKnown RBP2.49□□□□□ -2.01
C11orf88-204ENST00000529661 PSG4Q00888 419 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 CDK10Q15131 360 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 MRPL2Q5T653 305 aaKnown RBP2.49□□□□□ -2.01
C11orf88-204ENST00000529661 C16orf47Q6ZP98 133 aaPredicted RBP2.49□□□□□ -2.01
C11orf88-204ENST00000529661 MARCH3Q86UD3 253 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 ZBTB8OSQ8IWT0 167 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 ZNF567Q8N184 647 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 UBL4BQ8N7F7 174 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 TMEM75Q8N9X5 138 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 BORCS7Q96B45 105 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 OR2V2Q96R30 315 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 CMSS1Q9BQ75 279 aaKnown RBP2.49□□□□□ -2.01
C11orf88-204ENST00000529661 THTPAQ9BU02 230 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 KIFC1Q9BW19 673 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 GTSF1LQ9H1H1 148 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 C8orf4Q9NR00 106 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 ANGPT4Q9Y264 503 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 FIS1Q9Y3D6 152 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 RPRD2Q5VT52 1461 aaKnown RBP2.49□□□□□ -2.01
C11orf88-204ENST00000529661 SYNMO15061 1565 aa2.49□□□□□ -2.01
C11orf88-204ENST00000529661 DSCAML1Q8TD84 2053 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 VIRMAQ69YN4 1812 aaKnown RBP2.48□□□□□ -2.01
C11orf88-204ENST00000529661 A0A1B0GV72 72 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 BHLHE40O14503 412 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 LTAP01374 205 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 SEC11BP0C7V7 166 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 OR13C7P0DN81 318 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms