RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 C5orf30Q96GV9 206 aa11.25□□□□□ -0.61
USF1-209ENST00000529476 S1PR3Q99500 378 aa11.25□□□□□ -0.61
USF1-209ENST00000529476 MRPL20Q9BYC9 149 aaKnown RBP11.25□□□□□ -0.61
USF1-209ENST00000529476 VPREB3Q9UKI3 123 aa11.25□□□□□ -0.61
USF1-209ENST00000529476 TRIM77I1YAP6 450 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 TXNL1O43396 289 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 PPYP01298 95 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 RNASE1P07998 156 aaKnown RBP11.24□□□□□ -0.61
USF1-209ENST00000529476 TAS2R19P59542 299 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 SSBP1Q04837 148 aaKnown RBP11.24□□□□□ -0.61
USF1-209ENST00000529476 ACTBL2Q562R1 376 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 ZNF660Q6AZW8 331 aaPredicted RBP11.24□□□□□ -0.61
USF1-209ENST00000529476 FAM71F2Q6NXP2 309 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 DHRS11Q6UWP2 260 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 CCBE1Q6UXH8 406 aaPredicted RBP11.24□□□□□ -0.61
USF1-209ENST00000529476 TMEM219Q86XT9 240 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 Q8N402 240 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 DRAXINQ8NBI3 349 aaPredicted RBP11.24□□□□□ -0.61
USF1-209ENST00000529476 OR4D10Q8NGI6 311 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 CAPSLQ8WWF8 208 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 GIMAP1Q8WWP7 306 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 NABP2Q9BQ15 211 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 ZNF2Q9BSG1 426 aaPredicted RBP11.24□□□□□ -0.61
USF1-209ENST00000529476 THAP7Q9BT49 309 aaPredicted RBP11.24□□□□□ -0.61
USF1-209ENST00000529476 TINAGL1Q9GZM7 467 aaPredicted RBP11.24□□□□□ -0.61
USF1-209ENST00000529476 SRRQ9GZT4 340 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 GHITMQ9H3K2 345 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 SDHAF2Q9NX18 166 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 TCF19Q9Y242 345 aa11.24□□□□□ -0.61
USF1-209ENST00000529476 A6NDX4 124 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 FAM90A9PA6NNJ1 464 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 M0R1X1 148 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 KCNAB3O43448 404 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 GPR137BO60478 399 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 CD74P04233 296 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 SNRNP70P08621 437 aaKnown RBP11.23□□□□□ -0.61
USF1-209ENST00000529476 CSF1P09603 554 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 CT45A6P0DMU7 189 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 CT45A5P0DMU8 189 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 CT45A7P0DMV0 189 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 LINC00205P59089 165 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 FXYD4P59646 89 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 LSAMPQ13449 338 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 HABP2Q14520 560 aaPredicted RBP11.23□□□□□ -0.61
USF1-209ENST00000529476 RNASE10Q5GAN6 216 aaKnown RBP11.23□□□□□ -0.61
USF1-209ENST00000529476 VAX1Q5SQQ9 334 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 STEAP1BQ6NZ63 245 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 C16orf87Q6PH81 154 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 GLDNQ6ZMI3 551 aaPredicted RBP11.23□□□□□ -0.61
USF1-209ENST00000529476 MFSD4AQ8N468 514 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.23□□□□□ -0.61
USF1-209ENST00000529476 FAM216AQ8WUB2 273 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 TRIM63Q969Q1 353 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 ZNF107Q9UII5 783 aaPredicted RBP11.23□□□□□ -0.61
USF1-209ENST00000529476 GAB2Q9UQC2 676 aa11.23□□□□□ -0.61
USF1-209ENST00000529476 ANKRD20A5PA0PJZ0 165 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 CHST1O43916 411 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 RAB3DO95716 219 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 IGKV1D-33P01593 117 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 IGKV1-33P01594 117 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 IGLV2-14P01704 120 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 TBPP20226 339 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 HERV-K104P61576 105 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 TSPAN5P62079 268 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 FAAP20Q6NZ36 180 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 TMEM17Q86X19 198 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 ZNF645Q8N7E2 425 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 OR6F1Q8NGZ6 308 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 SECTM1Q8WVN6 248 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 TAF15Q92804 592 aaKnown RBP eCLIP11.22□□□□□ -0.61
USF1-209ENST00000529476 SDHCQ99643 169 aaPredicted RBP11.22□□□□□ -0.61
USF1-209ENST00000529476 AKIP1Q9NQ31 210 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 CCL28Q9NRJ3 127 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 TAS2R8Q9NYW2 309 aa11.22□□□□□ -0.61
USF1-209ENST00000529476 FAM181BA6NEQ2 426 aa11.21□□□□□ -0.61
USF1-209ENST00000529476 IFNA6P05013 189 aa11.21□□□□□ -0.61
USF1-209ENST00000529476 FAM106CPP0CH98 169 aa11.21□□□□□ -0.61
USF1-209ENST00000529476 AKAIN1P0CW23 69 aa11.21□□□□□ -0.61
USF1-209ENST00000529476 CD1BP29016 333 aa11.21□□□□□ -0.61
USF1-209ENST00000529476 ZNF45Q02386 682 aa11.21□□□□□ -0.61
USF1-209ENST00000529476 HES1Q14469 280 aa11.21□□□□□ -0.61
USF1-209ENST00000529476 HNF4GQ14541 408 aa11.21□□□□□ -0.61
USF1-209ENST00000529476 LINC00299Q6ZSB3 139 aa11.21□□□□□ -0.61
USF1-209ENST00000529476 THNSL2Q86YJ6 484 aa11.21□□□□□ -0.61
USF1-209ENST00000529476 GDPD1Q8N9F7 314 aa11.21□□□□□ -0.61
USF1-209ENST00000529476 ZNF383Q8NA42 475 aa11.21□□□□□ -0.61
USF1-209ENST00000529476 MOB3AQ96BX8 217 aa11.21□□□□□ -0.61
USF1-209ENST00000529476 SLC5A7Q9GZV3 580 aa11.21□□□□□ -0.61
USF1-209ENST00000529476 FXYD6Q9H0Q3 95 aa11.21□□□□□ -0.61
USF1-209ENST00000529476 OR5H14A6NHG9 310 aa11.2□□□□□ -0.62
USF1-209ENST00000529476 H0YJW9 148 aa11.2□□□□□ -0.62
USF1-209ENST00000529476 AMY2AP04746 511 aa11.2□□□□□ -0.62
USF1-209ENST00000529476 ZNF735P0CB33 412 aa11.2□□□□□ -0.62
USF1-209ENST00000529476 TMEM11P17152 192 aa11.2□□□□□ -0.62
USF1-209ENST00000529476 EBI3Q14213 229 aa11.2□□□□□ -0.62
USF1-209ENST00000529476 BAK1Q16611 211 aa11.2□□□□□ -0.62
USF1-209ENST00000529476 LIAT1Q6ZQX7 453 aa11.2□□□□□ -0.62
USF1-209ENST00000529476 ARRDC1Q8N5I2 433 aa11.2□□□□□ -0.62
USF1-209ENST00000529476 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.2□□□□□ -0.62
USF1-209ENST00000529476 OR4C16Q8NGL9 310 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms