RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 Q6ZR03 302 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 ZNF826PQ6ZT77 177 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 SVBPQ8N300 66 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 OR8U1Q8NH10 309 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 EDARADDQ8WWZ3 215 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 ERGIC1Q969X5 290 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 GNPNAT1Q96EK6 184 aaPredicted RBP9.83□□□□□ -0.84
USF1-208ENST00000528768 SNX22Q96L94 193 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 HRH4Q9H3N8 390 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 MSL2Q9HCI7 577 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 FZR1Q9UM11 496 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 PPP1R3CQ9UQK1 317 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 TMA7Q9Y2S6 64 aaKnown RBP9.83□□□□□ -0.84
USF1-208ENST00000528768 DOCK7Q96N67 2140 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 TMEM218A2RU14 115 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 A8MXE2 369 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 UMAD1C9J7I0 102 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 FAM90A26D6RGX4 464 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 MGST3O14880 152 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 SCAF4O95104 1147 aaKnown RBP9.82□□□□□ -0.84
USF1-208ENST00000528768 TSPAN15O95858 294 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 F12P00748 615 aaPredicted RBP9.82□□□□□ -0.84
USF1-208ENST00000528768 HBZP02008 142 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 PRH1P02810 166 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 PSG2P11465 335 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 ZNF16P17020 682 aaPredicted RBP9.82□□□□□ -0.84
USF1-208ENST00000528768 CAMLGP49069 296 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 RAB2AP61019 212 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 POLR2GP62487 172 aaKnown RBP eCLIP9.82□□□□□ -0.84
USF1-208ENST00000528768 ALKBH2Q6NS38 261 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 TMEM108Q6UXF1 575 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 TMEM252Q8N6L7 170 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 LFNGQ8NES3 379 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 GPR146Q96CH1 333 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 DIRC2Q96SL1 478 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 TSNAXQ99598 290 aaKnown RBP9.82□□□□□ -0.84
USF1-208ENST00000528768 NCOR1P1Q9H4R4 102 aa9.82□□□□□ -0.84
USF1-208ENST00000528768 IGHV3-64DA0A0J9YX35 117 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 FAM24AA6NFZ4 105 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 SRRM5B3KS81 715 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 C12orf77C9JDV5 145 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 F8W036 122 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 C16orf97H3BN30 126 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 WNT9BO14905 357 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 SMAD7O15105 426 aaKnown RBP9.81□□□□□ -0.84
USF1-208ENST00000528768 PSPNO60542 156 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 LY86O95711 162 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 IFNA5P01569 189 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 SPP1P10451 314 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 IRF2P14316 349 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 EPHA1P21709 976 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 TAS2R30P59541 319 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 HTD2P86397 168 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 AESQ08117 197 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 PEA15Q15121 130 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 BTNL8Q6UX41 500 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 ZNF66Q6ZN08 573 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 Q6ZRG5 221 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 DRAM1Q8N682 238 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 CD300LFQ8TDQ1 290 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 MEGF10Q96KG7 1140 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 Q96MF0 132 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 HSD17B10Q99714 261 aaKnown RBP9.81□□□□□ -0.84
USF1-208ENST00000528768 PBDC1Q9BVG4 233 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 C11orf1Q9H5F2 150 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 NGBQ9NPG2 151 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 ZDHHC8Q9ULC8 765 aa9.81□□□□□ -0.84
USF1-208ENST00000528768 SONP18583 2426 aaKnown RBP9.81□□□□□ -0.84
USF1-208ENST00000528768 ARID1AO14497 2285 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 IGLV3-9A0A075B6K5 115 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 TRAV39A0A0B4J263 110 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 CHST1O43916 411 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 DANCRP0C864 163 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 BMP5P22003 454 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 PTAFRP25105 342 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 LPAR6P43657 344 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 CEBPDP49716 269 aaPredicted RBP9.8□□□□□ -0.84
USF1-208ENST00000528768 DVL1P1P54792 670 aaPredicted RBP9.8□□□□□ -0.84
USF1-208ENST00000528768 HBG1P69891 147 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 HBG2P69892 147 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 TAGLNQ01995 201 aaKnown RBP9.8□□□□□ -0.84
USF1-208ENST00000528768 NHLH2Q02577 135 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 CXorf66Q5JRM2 361 aaPredicted RBP9.8□□□□□ -0.84
USF1-208ENST00000528768 SLC25A24Q6NUK1 477 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 DPPA3Q6W0C5 159 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 C5orf24Q7Z6I8 188 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 CIARTQ8N365 385 aaPredicted RBP9.8□□□□□ -0.84
USF1-208ENST00000528768 NUP37Q8NFH4 326 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 OR1L1Q8NH94 360 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 MRGPRDQ8TDS7 321 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 SEC11CQ9BY50 192 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 MAGT1Q9H0U3 335 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 OR2D2Q9H210 308 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 COA4Q9NYJ1 87 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 OR6C3Q9NZP0 311 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 CACFD1Q9UGQ2 172 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 IL19Q9UHD0 177 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 MMP24Q9Y5R2 645 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 WSB1Q9Y6I7 421 aa9.8□□□□□ -0.84
USF1-208ENST00000528768 IGSF23A1L1A6 192 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms