RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 CCL8P80075 99 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 ZFP30Q9Y2G7 519 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 KCNK7Q9Y2U2 307 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 HILPDAQ9Y5L2 63 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 SMCHD1A6NHR9 2005 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 TRAV34A0A0B4J273 112 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 C5orf52A6NGY3 159 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 C4orf51C9J302 202 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 CRXO43186 299 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-219ENST00000528621 MESP2Q0VG99 397 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 NCMAPQ5T1S8 102 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 MUC15Q8N387 334 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 CISD1Q9NZ45 108 aaKnown RBP7.32□□□□□ -1.24
CTNND1-219ENST00000528621 TUBD1Q9UJT1 453 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 NUP205Q92621 2012 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 MELTFP08582 738 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 ACAA1P09110 424 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-219ENST00000528621 RAB9AP51151 201 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 SPANXN1Q5VSR9 72 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 SLC25A33Q9BSK2 321 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 LHFPL6Q9Y693 200 aa7.32□□□□□ -1.24
CTNND1-219ENST00000528621 IGKV3-7A0A075B6H7 116 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 SNURFLB1AK76 121 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 SCTP09683 121 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 HKR1P10072 659 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 NRN1LQ496H8 165 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 SMUG1Q53HV7 270 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 OR2D3Q8NGH3 330 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 FAM216AQ8WUB2 273 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 MRPL32Q9BYC8 188 aaKnown RBP7.31□□□□□ -1.24
CTNND1-219ENST00000528621 UBE2L6O14933 153 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 PTGDSP41222 190 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 HIST3H3Q16695 136 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 OR8A1Q8NGG7 326 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 OR4A5Q8NH83 315 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 TMEM186Q96B77 213 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 C16orf92Q96LL3 132 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 AQP10Q96PS8 301 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 ELOVL1Q9BW60 279 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 ZNF430Q9H8G1 570 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-219ENST00000528621 TRAV20A0A0B4J274 112 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 SS18L1O75177 396 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-219ENST00000528621 RNF224P0DH78 156 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 CEBPDP49716 269 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-219ENST00000528621 NUBP1P53384 320 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 PKIAP61925 76 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 RPL8P62917 257 aaKnown RBP7.31□□□□□ -1.24
CTNND1-219ENST00000528621 SCGB1D4Q6XE38 83 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 ISOC2Q96AB3 205 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 CCL19Q99731 98 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 MRPS18CQ9Y3D5 142 aaKnown RBP7.31□□□□□ -1.24
CTNND1-219ENST00000528621 KIR2DL2P43627 348 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-219ENST00000528621 Q96M66 194 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 OR5AC2Q9NZP5 309 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 GCM2O75603 506 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-219ENST00000528621 CD74P04233 296 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 ZNF146Q15072 292 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 SMIM8Q96KF7 97 aa7.31□□□□□ -1.24
CTNND1-219ENST00000528621 A0A1W2PR77 199 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 CIDEAO60543 219 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 RPS11P62280 158 aaKnown RBP eCLIP7.3□□□□□ -1.24
CTNND1-219ENST00000528621 ZNF880Q6PDB4 577 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 CBLN2Q8IUK8 224 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 TPRX1Q8N7U7 411 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 CALYQ9NYX4 217 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 PSME4Q14997 1843 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 A8MWL6 223 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 LMX1BO60663 402 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 AMY1AP04745 511 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 CD40P25942 277 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 ZNF137PP52743 207 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 TMEM78Q5T7P6 136 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 ZNF841Q6ZN19 808 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 HS3ST3B1Q9Y662 390 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 MCM3APO60318 1980 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 CXCL2P19875 107 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 RPL29P47914 159 aaKnown RBP7.3□□□□□ -1.24
CTNND1-219ENST00000528621 MFAP4P55083 255 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 ZNF738Q8NE65 137 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 NPDC1Q9NQX5 325 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-219ENST00000528621 DLL3Q9NYJ7 618 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 ZNF236Q9UL36 1845 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 IGKV1D-42A0A075B6H8 117 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 KLF7O75840 302 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-219ENST00000528621 IGLV3-19P01714 112 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 PDLIM4P50479 330 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 ATP5G2Q06055 141 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 OR5P3Q8WZ94 311 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 MS4A3Q96HJ5 214 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 FOXJ2Q9P0K8 574 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 AUP1Q9Y679 476 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 PLXNA1Q9UIW2 1896 aa7.3□□□□□ -1.24
CTNND1-219ENST00000528621 KCNAB3O43448 404 aa7.29□□□□□ -1.24
CTNND1-219ENST00000528621 CDCP2Q5VXM1 449 aa7.29□□□□□ -1.24
CTNND1-219ENST00000528621 C1orf162Q8NEQ5 155 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-219ENST00000528621 COPS9Q8WXC6 57 aa7.29□□□□□ -1.24
CTNND1-219ENST00000528621 AMELYQ99218 206 aa7.29□□□□□ -1.24
CTNND1-219ENST00000528621 WNT5BQ9H1J7 359 aa7.29□□□□□ -1.24
CTNND1-219ENST00000528621 RNF115Q9Y4L5 304 aa7.29□□□□□ -1.24
CTNND1-219ENST00000528621 TMSB15BA0A087X1C1 80 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms