RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 PITPNAQ00169 270 aa9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 C5orf64Q2M2E5 130 aa9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 CDNFQ49AH0 187 aa9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 PDLIM3Q53GG5 364 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 KPRPQ5T749 579 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 HACD4Q5VWC8 232 aa9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 FAM131AQ6UXB0 335 aa9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 RNF152Q8N8N0 203 aa9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 RITA1Q96K30 269 aa9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 HSPB9Q9BQS6 159 aa9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 DCSTAMPQ9H295 470 aa9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 RNF167Q9H6Y7 350 aa9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 KIAA1456Q9P272 454 aa9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 ZNF107Q9UII5 783 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 RNF150Q9ULK6 438 aa9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 WASHC3Q9Y3C0 194 aa9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 ETV7Q9Y603 341 aa9.53□□□□□ -0.88
TRAPPC4-209ENST00000528230 G3V4G9 280 aa9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 PF4P02776 101 aa9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 TFAP2AP05549 437 aa9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 CLEC2LP0C7M8 214 aa9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 SNRPBP14678 240 aaKnown RBP9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 MXD1Q05195 221 aa9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 FOXE3Q13461 319 aa9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 BEAN1Q3B7T3 259 aa9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 ZNF260Q3ZCT1 412 aa9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 IGSF11Q5DX21 431 aa9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 KHDC1LQ5JSQ8 128 aa9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 LIN54Q6MZP7 749 aa9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 CROCCP3Q8IVE0 287 aa9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 RBMXL1Q96E39 390 aaKnown RBP9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 RHBDL2Q9NX52 303 aa9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 ZNF230Q9UIE0 474 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC4-209ENST00000528230 A0A0A6YYH2 397 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 A6NJ64 397 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 TRIM64CA6NLI5 447 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 H7C2Y5 167 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 BET1O15155 118 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 IGHG4P01861 327 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 CTXN2P0C2S0 81 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 CD33P20138 364 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 VDAC1P21796 283 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 CNTFRP26992 372 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 TAGLNQ01995 201 aaKnown RBP9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 CFHR3Q02985 330 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 CXorf66Q5JRM2 361 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 IDNKQ5T6J7 187 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 ZNF660Q6AZW8 331 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 GLDNQ6ZMI3 551 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 C1QL4Q86Z23 238 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 LGALS14Q8TCE9 139 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 YIPF6Q96EC8 236 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 OR51J1Q9H342 316 aa9.51□□□□□ -0.89
TRAPPC4-209ENST00000528230 IGHV7-81A0A0B4J1V7 117 aa9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 RRHO14718 337 aa9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 AIREO43918 545 aa9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 DUS4LO95620 317 aaKnown RBP9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 OR8U9P0C7N5 309 aa9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 MYCNOSP40205 109 aa9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 CDX1P47902 265 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 THBS3P49746 956 aa9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 PDPNQ86YL7 162 aa9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 ZNF695Q8IW36 515 aa9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 H1FOOQ8IZA3 346 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 ZNF383Q8NA42 475 aa9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 DRAXINQ8NBI3 349 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 OR5H6Q8NGV6 325 aa9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 OR8U1Q8NH10 309 aa9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 MAFIPQ8WZ33 124 aa9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 TSNAXQ99598 290 aaKnown RBP9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 GINS4Q9BRT9 223 aa9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 ST6GALNAC5Q9BVH7 336 aa9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 ELF5Q9UKW6 265 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 SPATA2Q9UM82 520 aa9.5□□□□□ -0.89
TRAPPC4-209ENST00000528230 IGKV1D-8A0A087WSZ0 117 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 TMEM235A6NFC5 223 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 M0R1X1 148 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 SPDEFO95238 335 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 APOA2P02652 100 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 PSMB8P28062 276 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 PPIFP30405 207 aaKnown RBP9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 CRIP2P52943 208 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 GNG2P59768 71 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 OXLD1Q5BKU9 147 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 CNIH2Q6PI25 160 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 REC114Q7Z4M0 266 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 FLYWCH2Q96CP2 140 aaKnown RBP9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 SLC25A38Q96DW6 304 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 RCC1LQ96I51 464 aaKnown RBP9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 OR2D2Q9H210 308 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 FBXL15Q9H469 300 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 DIABLOQ9NR28 239 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 SDHAF2Q9NX18 166 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 RBM7Q9Y580 266 aaKnown RBP9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 MEGF8Q7Z7M0 2845 aa9.49□□□□□ -0.89
TRAPPC4-209ENST00000528230 NOTCH1P46531 2555 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 NOTCH3Q9UM47 2321 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 TRAV18A0A075B6X5 111 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 TRAV41A0A0B4J266 112 aa9.48□□□□□ -0.89
TRAPPC4-209ENST00000528230 NUDT19A8MXV4 375 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms