RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 TRBV20OR9-2A0A075B6H5 130 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 GRIFINA4D1Z8 144 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 NPFFO15130 113 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 GAPDHP04406 335 aaKnown RBP6.32□□□□□ -1.4
CTNND1-216ENST00000527467 CX3CL1P78423 397 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 KLF9Q13886 244 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-216ENST00000527467 CEACAM16Q2WEN9 425 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 ALKBH6Q3KRA9 238 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 KIAA1644Q3SXP7 199 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 TCTN3Q6NUS6 607 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 ZNF740Q8NDX6 193 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 OR4C3Q8NH37 302 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 WBP1Q96G27 269 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 C1orf43Q9BWL3 253 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 LOC285556D6RIA3 1793 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 EML2O95834 649 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 EPPINO95925 133 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 CFDP00746 253 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-216ENST00000527467 HOXC4P09017 264 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-216ENST00000527467 SELENOTP62341 195 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 CCL7P80098 99 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 TCF15Q12870 199 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 DMRTC1Q5HYR2 192 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 ADAMTSL4Q6UY14 1074 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 MAVSQ7Z434 540 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 CXorf67Q86X51 503 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-216ENST00000527467 ABHD14BQ96IU4 210 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 PGLYRP3Q96LB9 341 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 QTRT1Q9BXR0 403 aaKnown RBP6.32□□□□□ -1.4
CTNND1-216ENST00000527467 NPVFQ9HCQ7 196 aa6.32□□□□□ -1.4
CTNND1-216ENST00000527467 MYH4Q9Y623 1939 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 SPTY2D1-AS1A0A0U1RR47 76 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 A0A1W2PRS3 328 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 LILRA5A6NI73 299 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 C3orf80F5H4A9 247 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 K7EQS6 105 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 HAX1O00165 279 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 ASAH2BP0C7U1 165 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 HOXB1P14653 301 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-216ENST00000527467 CXCL3P19876 107 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 ZNF56Q15929 161 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 TMEM155Q4W5P6 130 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 WDR38Q5JTN6 314 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 CFAP161Q6P656 301 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 SRSF12Q8WXF0 261 aaKnown RBP6.31□□□□□ -1.4
CTNND1-216ENST00000527467 C16orf92Q96LL3 132 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 C4orf45Q96LM5 186 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 PRSS27Q9BQR3 290 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 RTN4RQ9BZR6 473 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 ZNF71Q9NQZ8 489 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-216ENST00000527467 TMEM56-RWDD3S4R434 201 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 A0A1W2PS18 150 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 MEX3AA1L020 520 aaKnown RBP6.31□□□□□ -1.4
CTNND1-216ENST00000527467 PPIAL4DF5H284 164 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 PLPP1O14494 284 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 SLC25A1P53007 311 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 MESTQ5EB52 335 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 PQLC2Q6ZP29 291 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 MFRPQ9BY79 579 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 BRCA1P38398 1863 aaKnown RBP6.31□□□□□ -1.4
CTNND1-216ENST00000527467 H7C1H1 209 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 KLKB1P03952 638 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 CRYBB2P43320 205 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 SUMO3P55854 103 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-216ENST00000527467 PRSS12P56730 875 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 RAC3P60763 192 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 TMEM258P61165 79 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 TSPO2Q5TGU0 170 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 MMD2Q8IY49 270 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 ST6GALNAC6Q969X2 333 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 HIST1H2BAQ96A08 127 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 ZNF479Q96JC4 524 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 MRPL20Q9BYC9 149 aaKnown RBP6.31□□□□□ -1.4
CTNND1-216ENST00000527467 GHITMQ9H3K2 345 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 DAPP1Q9UN19 280 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 PXMP4Q9Y6I8 212 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 CNTRLQ7Z7A1 2325 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 C7orf66A4D0T2 115 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 NKX2-6A6NCS4 301 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 PATE3B3GLJ2 98 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 PPIHO43447 177 aaKnown RBP6.31□□□□□ -1.4
CTNND1-216ENST00000527467 LCN2P80188 198 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 PSG6Q00889 435 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 POU2AF1Q16633 256 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 RIMKLAQ8IXN7 391 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 GAPTQ8N292 157 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 CHODLQ9H9P2 273 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 PPT2Q9UMR5 302 aa6.31□□□□□ -1.4
CTNND1-216ENST00000527467 BAZ2AQ9UIF9 1905 aaKnown RBP6.3□□□□□ -1.4
CTNND1-216ENST00000527467 TRAV5A0A0B4J249 113 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 A0A1B0GTH9 108 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 A0A1W2PR48 441 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 PGPA6NDG6 321 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 MPTX1A8MV57 137 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 KLK2P20151 261 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 RPL32P62910 135 aaKnown RBP6.3□□□□□ -1.4
CTNND1-216ENST00000527467 GGTLC2Q14390 218 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 AMER3Q8N944 861 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 MORN4Q8NDC4 146 aa6.3□□□□□ -1.4
CTNND1-216ENST00000527467 RAX2Q96IS3 184 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms