RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 MRPL20Q9BYC9 149 aaKnown RBP8.62□□□□□ -1.03
NEDD8-205ENST00000527046 GHITMQ9H3K2 345 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 CCL28Q9NRJ3 127 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 PLSCR3Q9NRY6 295 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 EHFQ9NZC4 300 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 PIPOXQ9P0Z9 390 aa8.62□□□□□ -1.03
NEDD8-205ENST00000527046 AMMECR1Q9Y4X0 333 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-205ENST00000527046 JMJD1CQ15652 2540 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 IGHV3-72A0A0B4J1Y9 119 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 LINC00473A8K010 186 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 TCF21O43680 179 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 RNASE1P07998 156 aaKnown RBP8.61□□□□□ -1.03
NEDD8-205ENST00000527046 CEACAM3P40198 252 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 ARPC4P59998 168 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 KRTAP24-1Q3LI83 254 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 PYDC2Q56P42 97 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 FAM71F2Q6NXP2 309 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 STEAP1BQ6NZ63 245 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 GLDNQ6ZMI3 551 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-205ENST00000527046 Q6ZS46 218 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 OR8H3Q8N146 312 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 Q8N402 240 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 DRAXINQ8NBI3 349 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-205ENST00000527046 OR5H2Q8NGV7 314 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 OR56B4Q8NH76 319 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 SSMEM1Q8WWF3 244 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 GINS4Q9BRT9 223 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 ZNF2Q9BSG1 426 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-205ENST00000527046 FXYD6Q9H0Q3 95 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 OR2D2Q9H210 308 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 TNFRSF19Q9NS68 423 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 TCF19Q9Y242 345 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 POMT1Q9Y6A1 747 aa8.61□□□□□ -1.03
NEDD8-205ENST00000527046 H0YJW9 148 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 GPR137BO60478 399 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 SNRNP70P08621 437 aaKnown RBP8.6□□□□□ -1.03
NEDD8-205ENST00000527046 CD1BP29016 333 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 DUTP33316 252 aaKnown RBP8.6□□□□□ -1.03
NEDD8-205ENST00000527046 LUMP51884 338 aaPredicted RBP8.6□□□□□ -1.03
NEDD8-205ENST00000527046 TAS2R46P59540 309 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 TAS2R19P59542 299 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 ACTBP60709 375 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 ACTG1P63261 375 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 IFITM3Q01628 133 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 ZNF45Q02386 682 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 LSAMPQ13449 338 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 LY6EQ16553 131 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 SPANXN2Q5MJ10 180 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 C16orf87Q6PH81 154 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 TGIF2LXQ8IUE1 241 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 GDPD1Q8N9F7 314 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.6□□□□□ -1.03
NEDD8-205ENST00000527046 OR4C16Q8NGL9 310 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 OR13C8Q8NGS7 320 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 FAM216AQ8WUB2 273 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 EAF1Q96JC9 268 aaPredicted RBP8.6□□□□□ -1.03
NEDD8-205ENST00000527046 VPREB3Q9UKI3 123 aa8.6□□□□□ -1.03
NEDD8-205ENST00000527046 C2CD3Q4AC94 2353 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 FAM181BA6NEQ2 426 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 PLA2G10O15496 165 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 RAB3DO95716 219 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 CNTFRP26992 372 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 GPR12P47775 334 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 F2RL1P55085 397 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 UCP3P55916 312 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 SCGB2A2Q13296 93 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 MSMO1Q15800 293 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 MRGPRG-AS1Q2M3A8 158 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 ZNF818PQ6ZRF7 136 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 MOB3BQ86TA1 216 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 TMEM219Q86XT9 240 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 ZNF645Q8N7E2 425 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 OR6F1Q8NGZ6 308 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 OR5R1Q8NH85 324 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 RBM14Q96PK6 669 aaKnown RBP8.59□□□□□ -1.03
NEDD8-205ENST00000527046 DPAGT1Q9H3H5 408 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 HRASLSQ9HDD0 168 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 ZNF221Q9UK13 617 aa8.59□□□□□ -1.03
NEDD8-205ENST00000527046 FBN1P35555 2871 aaKnown RBP8.58□□□□□ -1.04
NEDD8-205ENST00000527046 SRRM4A7MD48 611 aaKnown RBP8.58□□□□□ -1.04
NEDD8-205ENST00000527046 M0R1X1 148 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 TXNL1O43396 289 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 IFNA2P01563 188 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 IGKV1D-33P01593 117 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 IGKV1-33P01594 117 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 IGKV1-16P04430 117 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 CSF1P09603 554 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 IL7P13232 177 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 TBPP20226 339 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 IL3RAP26951 378 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 BRS3P32247 399 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 PPP5CP53041 499 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 FXYD4P59646 89 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 BLCAPP62952 87 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 HNF4GQ14541 408 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 ACTBL2Q562R1 376 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 RNASE10Q5GAN6 216 aaKnown RBP8.58□□□□□ -1.04
NEDD8-205ENST00000527046 CCDC144NLQ6NUI1 221 aa8.58□□□□□ -1.04
NEDD8-205ENST00000527046 RBMS3Q6XE24 437 aaKnown RBP8.58□□□□□ -1.04
NEDD8-205ENST00000527046 ARRDC1Q8N5I2 433 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms