RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 OR2W1Q9Y3N9 320 aa13.74□□□□□ -0.21
LMX1B-203ENST00000526117 ZNF736B4DX44 427 aaPredicted RBP13.73□□□□□ -0.21
LMX1B-203ENST00000526117 RBBP9O75884 186 aa13.73□□□□□ -0.21
LMX1B-203ENST00000526117 OR8U9P0C7N5 309 aa13.73□□□□□ -0.21
LMX1B-203ENST00000526117 GPR12P47775 334 aa13.73□□□□□ -0.21
LMX1B-203ENST00000526117 TAGLNQ01995 201 aaKnown RBP13.73□□□□□ -0.21
LMX1B-203ENST00000526117 RPL39P5Q59GN2 51 aa13.73□□□□□ -0.21
LMX1B-203ENST00000526117 GVQW1Q8N7I0 195 aa13.73□□□□□ -0.21
LMX1B-203ENST00000526117 OR5AP2Q8NGF4 316 aa13.73□□□□□ -0.21
LMX1B-203ENST00000526117 OR8U1Q8NH10 309 aa13.73□□□□□ -0.21
LMX1B-203ENST00000526117 GPX8Q8TED1 209 aa13.73□□□□□ -0.21
LMX1B-203ENST00000526117 RNF5Q99942 180 aa13.73□□□□□ -0.21
LMX1B-203ENST00000526117 OR2D2Q9H210 308 aa13.73□□□□□ -0.21
LMX1B-203ENST00000526117 LIN7CQ9NUP9 197 aaKnown RBP13.73□□□□□ -0.21
LMX1B-203ENST00000526117 NECAP2Q9NVZ3 263 aa13.73□□□□□ -0.21
LMX1B-203ENST00000526117 H0YJW9 148 aa13.72□□□□□ -0.21
LMX1B-203ENST00000526117 PTHLHP12272 177 aa13.72□□□□□ -0.21
LMX1B-203ENST00000526117 ARPC4P59998 168 aa13.72□□□□□ -0.21
LMX1B-203ENST00000526117 MSMO1Q15800 293 aa13.72□□□□□ -0.21
LMX1B-203ENST00000526117 ABCA11PQ4W5N1 156 aa13.72□□□□□ -0.21
LMX1B-203ENST00000526117 FAM71E2Q8N5Q1 922 aa13.72□□□□□ -0.21
LMX1B-203ENST00000526117 Q8N9W7 124 aa13.72□□□□□ -0.21
LMX1B-203ENST00000526117 SLIRPQ9GZT3 109 aaKnown RBP13.72□□□□□ -0.21
LMX1B-203ENST00000526117 NXF2Q9GZY0 626 aaKnown RBP13.72□□□□□ -0.21
LMX1B-203ENST00000526117 IFT46Q9NQC8 304 aa13.72□□□□□ -0.21
LMX1B-203ENST00000526117 SDHAF2Q9NX18 166 aa13.72□□□□□ -0.21
LMX1B-203ENST00000526117 RABL2AQ9UBK7 228 aaPredicted RBP13.72□□□□□ -0.21
LMX1B-203ENST00000526117 RABL2BQ9UNT1 228 aa13.72□□□□□ -0.21
LMX1B-203ENST00000526117 VDAC2P45880 294 aaPredicted RBP13.71□□□□□ -0.21
LMX1B-203ENST00000526117 LUMP51884 338 aaPredicted RBP13.71□□□□□ -0.21
LMX1B-203ENST00000526117 HNF4GQ14541 408 aa13.71□□□□□ -0.21
LMX1B-203ENST00000526117 Q6ZS46 218 aa13.71□□□□□ -0.21
LMX1B-203ENST00000526117 ZNF645Q8N7E2 425 aa13.71□□□□□ -0.21
LMX1B-203ENST00000526117 NPBQ8NG41 125 aa13.71□□□□□ -0.21
LMX1B-203ENST00000526117 MIXL1Q9H2W2 232 aa13.71□□□□□ -0.21
LMX1B-203ENST00000526117 SIGLEC9Q9Y336 463 aa13.71□□□□□ -0.21
LMX1B-203ENST00000526117 WASHC3Q9Y3C0 194 aa13.71□□□□□ -0.21
LMX1B-203ENST00000526117 FAM25AB3EWG3 89 aa13.7□□□□□ -0.22
LMX1B-203ENST00000526117 FAM25CB3EWG5 89 aa13.7□□□□□ -0.22
LMX1B-203ENST00000526117 FAM25GB3EWG6 89 aa13.7□□□□□ -0.22
LMX1B-203ENST00000526117 NDUFA3O95167 84 aa13.7□□□□□ -0.22
LMX1B-203ENST00000526117 IGHG2P01859 326 aa13.7□□□□□ -0.22
LMX1B-203ENST00000526117 TAS2R46P59540 309 aa13.7□□□□□ -0.22
LMX1B-203ENST00000526117 KRTAP10-3P60369 221 aa13.7□□□□□ -0.22
LMX1B-203ENST00000526117 CDK10Q15131 360 aa13.7□□□□□ -0.22
LMX1B-203ENST00000526117 PDPNQ86YL7 162 aa13.7□□□□□ -0.22
LMX1B-203ENST00000526117 GIMAP1Q8WWP7 306 aa13.7□□□□□ -0.22
LMX1B-203ENST00000526117 ADTRPQ96IZ2 230 aa13.7□□□□□ -0.22
LMX1B-203ENST00000526117 RSL24D1Q9UHA3 163 aaKnown RBP13.7□□□□□ -0.22
LMX1B-203ENST00000526117 ZNF580Q9UK33 172 aa13.7□□□□□ -0.22
LMX1B-203ENST00000526117 RNF150Q9ULK6 438 aa13.7□□□□□ -0.22
LMX1B-203ENST00000526117 OR5H8P0DN80 308 aa13.69□□□□□ -0.22
LMX1B-203ENST00000526117 NFYAP23511 347 aaPredicted RBP13.69□□□□□ -0.22
LMX1B-203ENST00000526117 F2RL1P55085 397 aa13.69□□□□□ -0.22
LMX1B-203ENST00000526117 ACTBP60709 375 aa13.69□□□□□ -0.22
LMX1B-203ENST00000526117 FAM131AQ6UXB0 335 aa13.69□□□□□ -0.22
LMX1B-203ENST00000526117 OVCH2Q7RTZ1 564 aa13.69□□□□□ -0.22
LMX1B-203ENST00000526117 KLHDC1Q8N7A1 406 aa13.69□□□□□ -0.22
LMX1B-203ENST00000526117 ZNF383Q8NA42 475 aa13.69□□□□□ -0.22
LMX1B-203ENST00000526117 SGMS2Q8NHU3 365 aa13.69□□□□□ -0.22
LMX1B-203ENST00000526117 C5orf30Q96GV9 206 aa13.69□□□□□ -0.22
LMX1B-203ENST00000526117 EXTL2Q9UBQ6 330 aa13.69□□□□□ -0.22
LMX1B-203ENST00000526117 RBM7Q9Y580 266 aaKnown RBP13.69□□□□□ -0.22
LMX1B-203ENST00000526117 A3GALT2U3KPV4 340 aa13.69□□□□□ -0.22
LMX1B-203ENST00000526117 NCBP2LA6PVI3 153 aaKnown RBP13.68□□□□□ -0.22
LMX1B-203ENST00000526117 M0R1X1 148 aa13.68□□□□□ -0.22
LMX1B-203ENST00000526117 CTDSP2O14595 271 aa13.68□□□□□ -0.22
LMX1B-203ENST00000526117 NBR2O15453 112 aa13.68□□□□□ -0.22
LMX1B-203ENST00000526117 SPDEFO95238 335 aa13.68□□□□□ -0.22
LMX1B-203ENST00000526117 APOA2P02652 100 aa13.68□□□□□ -0.22
LMX1B-203ENST00000526117 RRASP10301 218 aa13.68□□□□□ -0.22
LMX1B-203ENST00000526117 RCVRNP35243 200 aa13.68□□□□□ -0.22
LMX1B-203ENST00000526117 THBS3P49746 956 aa13.68□□□□□ -0.22
LMX1B-203ENST00000526117 MRPS10P82664 201 aaKnown RBP13.68□□□□□ -0.22
LMX1B-203ENST00000526117 DYRK1AQ13627 763 aa13.68□□□□□ -0.22
LMX1B-203ENST00000526117 MMDQ15546 238 aa13.68□□□□□ -0.22
LMX1B-203ENST00000526117 DHRS11Q6UWP2 260 aa13.68□□□□□ -0.22
LMX1B-203ENST00000526117 LAX1Q8IWV1 398 aa13.68□□□□□ -0.22
LMX1B-203ENST00000526117 DDB2Q92466 427 aa13.68□□□□□ -0.22
LMX1B-203ENST00000526117 MRPS7Q9Y2R9 242 aaKnown RBP13.68□□□□□ -0.22
LMX1B-203ENST00000526117 IGKV1D-13A0A0B4J2D9 117 aa13.67□□□□□ -0.22
LMX1B-203ENST00000526117 MEIS3P1A6NDR6 274 aa13.67□□□□□ -0.22
LMX1B-203ENST00000526117 HAX1O00165 279 aa13.67□□□□□ -0.22
LMX1B-203ENST00000526117 RGS5O15539 181 aa13.67□□□□□ -0.22
LMX1B-203ENST00000526117 KCNAB3O43448 404 aa13.67□□□□□ -0.22
LMX1B-203ENST00000526117 PPYP01298 95 aa13.67□□□□□ -0.22
LMX1B-203ENST00000526117 IGLV2-14P01704 120 aa13.67□□□□□ -0.22
LMX1B-203ENST00000526117 HLA-DRB1P01911 266 aa13.67□□□□□ -0.22
LMX1B-203ENST00000526117 IGKV1-13P0DP09 117 aa13.67□□□□□ -0.22
LMX1B-203ENST00000526117 FCGR2CP31995 323 aa13.67□□□□□ -0.22
LMX1B-203ENST00000526117 DUTP33316 252 aaKnown RBP13.67□□□□□ -0.22
LMX1B-203ENST00000526117 SSBP1Q04837 148 aaKnown RBP13.67□□□□□ -0.22
LMX1B-203ENST00000526117 ARSJQ5FYB0 599 aaPredicted RBP13.67□□□□□ -0.22
LMX1B-203ENST00000526117 ZNF660Q6AZW8 331 aaPredicted RBP13.67□□□□□ -0.22
LMX1B-203ENST00000526117 SNX29P2Q8IUI4 249 aa13.67□□□□□ -0.22
LMX1B-203ENST00000526117 RASL11BQ9BPW5 248 aa13.67□□□□□ -0.22
LMX1B-203ENST00000526117 NDUFA13Q9P0J0 144 aa13.67□□□□□ -0.22
LMX1B-203ENST00000526117 ZNF107Q9UII5 783 aaPredicted RBP13.67□□□□□ -0.22
LMX1B-203ENST00000526117 CTDSPLO15194 276 aa13.66□□□□□ -0.22
LMX1B-203ENST00000526117 TBPP20226 339 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms