RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 ITGB1BP1O14713 200 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 ZNF861PO60384 105 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 ENTPD5O75356 428 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 ATP5LO75964 103 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 MPZL1O95297 269 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 INSP01308 110 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 IFNGP01579 166 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 SERPINA5P05154 406 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 GYPBP06028 91 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 CD3GP09693 182 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 CCL2P13500 99 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 ZNF35P13682 527 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 SPI1P17947 270 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 MSR1P21757 451 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 CRABP1P29762 137 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 PYCR1P32322 319 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 RPL13AP40429 203 aaKnown RBP2.59□□□□□ -1.99
CD44-219ENST00000525685 RPS27P42677 84 aaKnown RBP2.59□□□□□ -1.99
CD44-219ENST00000525685 CEBPDP49716 269 aaPredicted RBP2.59□□□□□ -1.99
CD44-219ENST00000525685 PPT1P50897 306 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 CEBPGP53567 150 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 CRISP1P54107 249 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 TAS2R19P59542 299 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 ERVS71-1P61550 626 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 HIST1H3AP68431 136 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 CDK5Q00535 292 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 PSG4Q00888 419 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 AQP6Q13520 282 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 GPR176Q14439 515 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 GINS1Q14691 196 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 MPPED2Q15777 294 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 TBC1D28Q2M2D7 210 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 DEFB113Q30KQ7 82 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 PABPC1L2AQ5JQF8 200 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 HIST2H3PS2Q5TEC6 136 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 LINC01590Q5TEZ4 76 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 TMEM236Q5W0B7 351 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 KDM4DQ6B0I6 523 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 C11orf71Q6IPW1 123 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 ZFP1Q6P2D0 407 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 HIST2H3AQ71DI3 136 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 DPPA2Q7Z7J5 298 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 GID4Q8IVV7 300 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 OR6V1Q8N148 313 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 LRRC18Q8N456 261 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 PNKDQ8N490 385 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 COMMD1Q8N668 190 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 SLC30A7Q8NEW0 376 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 PROKR2Q8NFJ6 384 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 SLC26A10Q8NG04 563 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 OR51L1Q8NGJ5 315 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 OR4D5Q8NGN0 318 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 OR2T4Q8NH00 348 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 DNAJC9Q8WXX5 260 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 RDH5Q92781 318 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 PELI1Q96FA3 418 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 CENPNQ96H22 339 aaPredicted RBP2.59□□□□□ -1.99
CD44-219ENST00000525685 CCL19Q99731 98 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 FOXC2Q99958 501 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 RASL11BQ9BPW5 248 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 GON7Q9BXV9 100 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 GABARAPL3Q9BY60 117 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 PKIBQ9C010 78 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 OR2H1Q9GZK4 316 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 VCX2Q9H322 139 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 RBKSQ9H477 322 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 RERGLQ9H628 205 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 ZNF442Q9H7R0 627 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 SIAEQ9HAT2 523 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 CCNB1IP1Q9NPC3 277 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 CMC2Q9NRP2 79 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 CA10Q9NS85 328 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 UFSP2Q9NUQ7 469 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 MRPL22Q9NWU5 206 aaKnown RBP2.59□□□□□ -1.99
CD44-219ENST00000525685 SIGLEC8Q9NYZ4 499 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 USE1Q9NZ43 259 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 NUFIP1Q9UHK0 495 aaKnown RBP2.59□□□□□ -1.99
CD44-219ENST00000525685 CLEC2DQ9UHP7 191 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 FBXL3Q9UKT7 428 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 POLR1DQ9Y2S0 133 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 LHFPL6Q9Y693 200 aa2.59□□□□□ -1.99
CD44-219ENST00000525685 USP9XQ93008 2570 aaPredicted RBP2.59□□□□□ -1.99
CD44-219ENST00000525685 FBN2P35556 2912 aa2.58□□□□□ -2
CD44-219ENST00000525685 A6NDX4 124 aa2.58□□□□□ -2
CD44-219ENST00000525685 CCDC182A6NF36 153 aa2.58□□□□□ -2
CD44-219ENST00000525685 OR6C6A6NF89 314 aa2.58□□□□□ -2
CD44-219ENST00000525685 ZNF729A6NN14 1252 aaPredicted RBP2.58□□□□□ -2
CD44-219ENST00000525685 F8W036 122 aa2.58□□□□□ -2
CD44-219ENST00000525685 TOR1AO14656 332 aa2.58□□□□□ -2
CD44-219ENST00000525685 RTL8CO15255 209 aa2.58□□□□□ -2
CD44-219ENST00000525685 RER1O15258 196 aa2.58□□□□□ -2
CD44-219ENST00000525685 SGCEO43556 437 aa2.58□□□□□ -2
CD44-219ENST00000525685 CCNKO75909 580 aa2.58□□□□□ -2
CD44-219ENST00000525685 SERPINA3P01011 423 aa2.58□□□□□ -2
CD44-219ENST00000525685 CD8AP01732 235 aa2.58□□□□□ -2
CD44-219ENST00000525685 MBP02144 154 aa2.58□□□□□ -2
CD44-219ENST00000525685 STAG3L2P0CL84 134 aa2.58□□□□□ -2
CD44-219ENST00000525685 SRMP19623 302 aa2.58□□□□□ -2
CD44-219ENST00000525685 HNF1AP20823 631 aa2.58□□□□□ -2
CD44-219ENST00000525685 CCNOP22674 350 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms