RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 HSD17B6O14756 317 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 DEGS1O15121 323 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 PLA2G10O15496 165 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 ZNF207O43670 478 aaKnown RBP2.62□□□□□ -1.99
CD44-217ENST00000525348 TYROBPO43914 113 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 ZNF861PO60384 105 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 SLC16A7O60669 478 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 ENTPD6O75354 484 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 CNMDO75829 334 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 SNAPC5O75971 98 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 CLIC3O95833 236 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 NRASP01111 189 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 SEMG1P04279 462 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 HSPB1P04792 205 aaKnown RBP2.62□□□□□ -1.99
CD44-217ENST00000525348 CTSDP07339 412 aaPredicted RBP2.62□□□□□ -1.99
CD44-217ENST00000525348 OR4A8P0C604 315 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 OR4Q2P0C623 313 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 DUX4L2P0CJ85 424 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 DUX4L3P0CJ86 424 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 DUX4L5P0CJ88 424 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 DUX4L6P0CJ89 424 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 DUX4L7P0CJ90 424 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 SMIM17P0DL12 118 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 SRIP30626 198 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 TGFBR1P36897 503 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 OPRD1P41143 372 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 RPL29P47914 159 aaKnown RBP2.62□□□□□ -1.99
CD44-217ENST00000525348 TCL1AP56279 114 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 NDUFA6P56556 154 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 GABARAPL2P60520 117 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 OC90Q02509 493 aaPredicted RBP2.62□□□□□ -1.99
CD44-217ENST00000525348 HIST1H1AQ02539 215 aaPredicted RBP2.62□□□□□ -1.99
CD44-217ENST00000525348 C1orf61Q13536 156 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 KIR2DS1Q14954 304 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 PDGFRLQ15198 375 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 OR8B8Q15620 311 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 C4orf26Q17RF5 130 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 TBC1D28Q2M2D7 210 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 TIGITQ495A1 244 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 ATP6AP1LQ52LC2 224 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 OR10J3Q5JRS4 329 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 DNAJC24Q6P3W2 148 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 TOMM20LQ6UXN7 152 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 GOLGA7Q7Z5G4 137 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 ZNF567Q8N184 647 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 CA13Q8N1Q1 262 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 OSR2Q8N2R0 312 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 C5orf17Q8NAS9 161 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 TSTD1Q8NFU3 115 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 OR4A4PQ8NGN8 299 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 OR13G1Q8NGZ3 307 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 OR5K2Q8NHB8 316 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 RFESDQ8TAC1 157 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 SFXN5Q8TD22 340 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 OR8D1Q8WZ84 308 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 ARL11Q969Q4 196 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 RAB39BQ96DA2 213 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 CCDC115Q96NT0 180 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 TRIB3Q96RU7 358 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 CLCC1Q96S66 551 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 HIST1H2BLQ99880 126 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 CBWD1Q9BRT8 395 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 ZNF649Q9BS31 505 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 C19orf24Q9BVV8 132 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 FAIM2Q9BWQ8 316 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 SEC11CQ9BY50 192 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 HES7Q9BYE0 225 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 OR8D2Q9GZM6 311 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 C20orf27Q9GZN8 174 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 SLC25A31Q9H0C2 315 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 GTSF1LQ9H1H1 148 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 ZDHHC11Q9H8X9 412 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 ZNF702PQ9H963 129 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 FBXO6Q9NRD1 293 aaPredicted RBP2.62□□□□□ -1.99
CD44-217ENST00000525348 DCAF13Q9NV06 445 aaKnown RBP2.62□□□□□ -1.99
CD44-217ENST00000525348 CLN6Q9NWW5 311 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 MRPL16Q9NX20 251 aaKnown RBP2.62□□□□□ -1.99
CD44-217ENST00000525348 MED29Q9NX70 200 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 SLC25A37Q9NYZ2 338 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 OR1A1Q9P1Q5 309 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 RPS6KB2Q9UBS0 482 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 DUX4Q9UBX2 424 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 ZNF629Q9UEG4 869 aaPredicted RBP2.62□□□□□ -1.99
CD44-217ENST00000525348 SLC2A6Q9UGQ3 507 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 NAT8BQ9UHF3 227 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 BOKQ9UMX3 212 aaPredicted RBP2.62□□□□□ -1.99
CD44-217ENST00000525348 LAMTOR2Q9Y2Q5 125 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 POLDIP2Q9Y2S7 368 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 PCYT1BQ9Y5K3 369 aaPredicted RBP2.62□□□□□ -1.99
CD44-217ENST00000525348 SNX10Q9Y5X0 201 aa2.62□□□□□ -1.99
CD44-217ENST00000525348 PAPPA2Q9BXP8 1791 aa2.61□□□□□ -1.99
CD44-217ENST00000525348 MYO10Q9HD67 2058 aa2.61□□□□□ -1.99
CD44-217ENST00000525348 A0A1W2PRD5 423 aa2.61□□□□□ -1.99
CD44-217ENST00000525348 MAP1LC3B2A6NCE7 125 aa2.61□□□□□ -1.99
CD44-217ENST00000525348 CASKO14936 926 aa2.61□□□□□ -1.99
CD44-217ENST00000525348 EIF4E2O60573 245 aaKnown RBP2.61□□□□□ -1.99
CD44-217ENST00000525348 TPST2O60704 377 aa2.61□□□□□ -1.99
CD44-217ENST00000525348 GCM2O75603 506 aaPredicted RBP2.61□□□□□ -1.99
CD44-217ENST00000525348 TNFSF13O75888 250 aa2.61□□□□□ -1.99
CD44-217ENST00000525348 SCGNO76038 276 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms