RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 GGHQ92820 318 aa18.34■□□□□ 0.53
USP47-205ENST00000525257 ZNF355PQ9NSJ1 428 aa18.34■□□□□ 0.53
USP47-205ENST00000525257 HYDINQ4G0P3 5121 aa18.34■□□□□ 0.53
USP47-205ENST00000525257 NAPSAO96009 420 aa18.33■□□□□ 0.52
USP47-205ENST00000525257 HTR2CP28335 458 aa18.33■□□□□ 0.52
USP47-205ENST00000525257 RPS27AP62979 156 aaKnown RBP18.33■□□□□ 0.52
USP47-205ENST00000525257 ZNF880Q6PDB4 577 aa18.33■□□□□ 0.52
USP47-205ENST00000525257 DRAXINQ8NBI3 349 aaPredicted RBP18.33■□□□□ 0.52
USP47-205ENST00000525257 GRPEL2Q8TAA5 225 aa18.33■□□□□ 0.52
USP47-205ENST00000525257 CYGBQ8WWM9 190 aa18.33■□□□□ 0.52
USP47-205ENST00000525257 SPATA25Q9BR10 227 aa18.33■□□□□ 0.52
USP47-205ENST00000525257 NICN1Q9BSH3 213 aa18.33■□□□□ 0.52
USP47-205ENST00000525257 TMEM59Q9BXS4 323 aa18.33■□□□□ 0.52
USP47-205ENST00000525257 KCNK15Q9H427 330 aa18.33■□□□□ 0.52
USP47-205ENST00000525257 RANGRFQ9HD47 186 aaPredicted RBP18.33■□□□□ 0.52
USP47-205ENST00000525257 UBBP0CG47 229 aa18.32■□□□□ 0.52
USP47-205ENST00000525257 MAPK3P27361 379 aaPredicted RBP18.32■□□□□ 0.52
USP47-205ENST00000525257 VEGFCP49767 419 aa18.32■□□□□ 0.52
USP47-205ENST00000525257 RNF5Q99942 180 aa18.32■□□□□ 0.52
USP47-205ENST00000525257 AGMATQ9BSE5 352 aa18.32■□□□□ 0.52
USP47-205ENST00000525257 OR1A1Q9P1Q5 309 aa18.32■□□□□ 0.52
USP47-205ENST00000525257 C13orf42A0A1B0GVH6 325 aa18.31■□□□□ 0.52
USP47-205ENST00000525257 ANKRD34BA5PLL1 514 aa18.31■□□□□ 0.52
USP47-205ENST00000525257 SLC22A1O15245 554 aa18.31■□□□□ 0.52
USP47-205ENST00000525257 CPEP16870 476 aa18.31■□□□□ 0.52
USP47-205ENST00000525257 ZP3P21754 424 aa18.31■□□□□ 0.52
USP47-205ENST00000525257 INSL4Q14641 139 aa18.31■□□□□ 0.52
USP47-205ENST00000525257 MOB1BQ7L9L4 216 aa18.31■□□□□ 0.52
USP47-205ENST00000525257 POC5Q8NA72 575 aa18.31■□□□□ 0.52
USP47-205ENST00000525257 THRSPQ92748 146 aa18.31■□□□□ 0.52
USP47-205ENST00000525257 TSNAXQ99598 290 aaKnown RBP18.31■□□□□ 0.52
USP47-205ENST00000525257 C11orf54Q9H0W9 315 aaPredicted RBP18.31■□□□□ 0.52
USP47-205ENST00000525257 TNCP24821 2201 aa18.31■□□□□ 0.52
USP47-205ENST00000525257 EFCAB10A6NFE3 127 aa18.3■□□□□ 0.52
USP47-205ENST00000525257 MYL12BO14950 172 aa18.3■□□□□ 0.52
USP47-205ENST00000525257 IGKV1-16P04430 117 aa18.3■□□□□ 0.52
USP47-205ENST00000525257 LINC00205P59089 165 aa18.3■□□□□ 0.52
USP47-205ENST00000525257 RPS16P62249 146 aaKnown RBP18.3■□□□□ 0.52
USP47-205ENST00000525257 FXYD3Q14802 87 aa18.3■□□□□ 0.52
USP47-205ENST00000525257 HAGHQ16775 308 aa18.3■□□□□ 0.52
USP47-205ENST00000525257 OR5T1Q8NG75 326 aa18.3■□□□□ 0.52
USP47-205ENST00000525257 ITGB1BP1O14713 200 aa18.29■□□□□ 0.52
USP47-205ENST00000525257 SPDEFO95238 335 aa18.29■□□□□ 0.52
USP47-205ENST00000525257 CD1AP06126 327 aa18.29■□□□□ 0.52
USP47-205ENST00000525257 CEACAM6P40199 344 aa18.29■□□□□ 0.52
USP47-205ENST00000525257 WNT4P56705 351 aa18.29■□□□□ 0.52
USP47-205ENST00000525257 UNC119Q13432 240 aa18.29■□□□□ 0.52
USP47-205ENST00000525257 SETD9Q8NE22 299 aa18.29■□□□□ 0.52
USP47-205ENST00000525257 EDARADDQ8WWZ3 215 aa18.29■□□□□ 0.52
USP47-205ENST00000525257 HDHD3Q9BSH5 251 aaPredicted RBP18.29■□□□□ 0.52
USP47-205ENST00000525257 SLC25A17O43808 307 aa18.28■□□□□ 0.52
USP47-205ENST00000525257 PROP1O75360 226 aa18.28■□□□□ 0.52
USP47-205ENST00000525257 HLA-DRB3P79483 266 aa18.28■□□□□ 0.52
USP47-205ENST00000525257 DEFA5Q01523 94 aa18.28■□□□□ 0.52
USP47-205ENST00000525257 KLF5Q13887 457 aaPredicted RBP18.28■□□□□ 0.52
USP47-205ENST00000525257 TTC23Q5W5X9 447 aa18.28■□□□□ 0.52
USP47-205ENST00000525257 GLT8D1Q68CQ7 371 aa18.28■□□□□ 0.52
USP47-205ENST00000525257 ZNF383Q8NA42 475 aa18.28■□□□□ 0.52
USP47-205ENST00000525257 OR9G4Q8NGQ1 327 aa18.28■□□□□ 0.52
USP47-205ENST00000525257 KCNG3Q8TAE7 436 aa18.28■□□□□ 0.52
USP47-205ENST00000525257 TM2D1Q9BX74 207 aa18.28■□□□□ 0.52
USP47-205ENST00000525257 PLEKHJ1Q9NW61 149 aa18.28■□□□□ 0.52
USP47-205ENST00000525257 A0A0A6YYD4 124 aa18.27■□□□□ 0.52
USP47-205ENST00000525257 H0Y980 276 aa18.27■□□□□ 0.52
USP47-205ENST00000525257 ZBTB25P24278 435 aa18.27■□□□□ 0.52
USP47-205ENST00000525257 SYNJ2BPP57105 145 aa18.27■□□□□ 0.52
USP47-205ENST00000525257 RBM48Q5RL73 367 aaKnown RBP18.27■□□□□ 0.52
USP47-205ENST00000525257 C1orf100Q5SVJ3 147 aa18.27■□□□□ 0.52
USP47-205ENST00000525257 IL34Q6ZMJ4 242 aa18.27■□□□□ 0.52
USP47-205ENST00000525257 LRRTM1Q86UE6 522 aa18.27■□□□□ 0.52
USP47-205ENST00000525257 TMED9Q9BVK6 235 aa18.27■□□□□ 0.52
USP47-205ENST00000525257 AK3Q9UIJ7 227 aa18.27■□□□□ 0.52
USP47-205ENST00000525257 PLECQ15149 4684 aaKnown RBP18.26■□□□□ 0.51
USP47-205ENST00000525257 A0A0G2JLM5 398 aa18.26■□□□□ 0.51
USP47-205ENST00000525257 H3BUA1 57 aa18.26■□□□□ 0.51
USP47-205ENST00000525257 CNIH1O95406 144 aa18.26■□□□□ 0.51
USP47-205ENST00000525257 APOA2P02652 100 aa18.26■□□□□ 0.51
USP47-205ENST00000525257 IFNA6P05013 189 aa18.26■□□□□ 0.51
USP47-205ENST00000525257 SSBP2P81877 361 aaPredicted RBP18.26■□□□□ 0.51
USP47-205ENST00000525257 ACSM3Q53FZ2 586 aa18.26■□□□□ 0.51
USP47-205ENST00000525257 AHSA2Q719I0 299 aa18.26■□□□□ 0.51
USP47-205ENST00000525257 PDPNQ86YL7 162 aa18.26■□□□□ 0.51
USP47-205ENST00000525257 TUBA4BQ9H853 241 aa18.26■□□□□ 0.51
USP47-205ENST00000525257 ZNF221Q9UK13 617 aa18.26■□□□□ 0.51
USP47-205ENST00000525257 ADAM30Q9UKF2 790 aa18.26■□□□□ 0.51
USP47-205ENST00000525257 TRBV6-6A0A0A6YYG2 114 aa18.25■□□□□ 0.51
USP47-205ENST00000525257 TMEM14DPA8MWL7 114 aa18.25■□□□□ 0.51
USP47-205ENST00000525257 SCTP09683 121 aa18.25■□□□□ 0.51
USP47-205ENST00000525257 QRFPP83859 136 aa18.25■□□□□ 0.51
USP47-205ENST00000525257 PJVKQ0ZLH3 352 aa18.25■□□□□ 0.51
USP47-205ENST00000525257 GTSCR1Q86UQ5 136 aa18.25■□□□□ 0.51
USP47-205ENST00000525257 RIMS4Q9H426 269 aaPredicted RBP18.25■□□□□ 0.51
USP47-205ENST00000525257 SOCS1O15524 211 aa18.24■□□□□ 0.51
USP47-205ENST00000525257 MOGAT2Q3SYC2 334 aa18.24■□□□□ 0.51
USP47-205ENST00000525257 PTX4Q96A99 478 aa18.24■□□□□ 0.51
USP47-205ENST00000525257 THAP7Q9BT49 309 aaPredicted RBP18.24■□□□□ 0.51
USP47-205ENST00000525257 RETNQ9HD89 108 aa18.24■□□□□ 0.51
USP47-205ENST00000525257 PSORS1C1Q9UIG5 152 aa18.24■□□□□ 0.51
USP47-205ENST00000525257 TRBV12-3P01733 135 aa18.23■□□□□ 0.51
USP47-205ENST00000525257 LAIR2Q6ISS4 152 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms