RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 RTL8BQ17RB0 113 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 DHRS7BQ6IAN0 325 aaPredicted RBP8.25□□□□□ -1.09
VPS13B-212ENST00000524330 C11orf71Q6IPW1 123 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 FAM71F2Q6NXP2 309 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 STX12Q86Y82 276 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 LYG1Q8N1E2 194 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 STOML3Q8TAV4 291 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 TNFRSF14Q92956 283 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 GPR146Q96CH1 333 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 CIB3Q96Q77 187 aaPredicted RBP8.25□□□□□ -1.09
VPS13B-212ENST00000524330 SLC25A32Q9H2D1 315 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.25□□□□□ -1.09
VPS13B-212ENST00000524330 PFDN2Q9UHV9 154 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 FRYQ5TBA9 3013 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 KIAA2026Q5HYC2 2103 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 PLCE1Q9P212 2302 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 NCOR2Q9Y618 2525 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 H0YIZ8 118 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 RBMXL2O75526 392 aaKnown RBP8.24□□□□□ -1.09
VPS13B-212ENST00000524330 SPDEFO95238 335 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 HRASP01112 189 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 IGLV2-14P01704 120 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 APOA2P02652 100 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 GAPDHP04406 335 aaKnown RBP8.24□□□□□ -1.09
VPS13B-212ENST00000524330 DANCRP0C864 163 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 HKR1P10072 659 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 SELLP14151 372 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 NQO2P16083 231 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 COL8A2P25067 703 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 DUTP33316 252 aaKnown RBP8.24□□□□□ -1.09
VPS13B-212ENST00000524330 CAV2P51636 162 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 TAS2R30P59541 319 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 RPP30P78346 268 aaKnown RBP8.24□□□□□ -1.09
VPS13B-212ENST00000524330 ZNF266Q14584 549 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 BAP18Q8IXM2 172 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 PDZD9Q8IXQ8 264 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 FGFRL1Q8N441 504 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 OR2C3Q8N628 320 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 DMBX1Q8NFW5 382 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 PARP12Q9H0J9 701 aaKnown RBP8.24□□□□□ -1.09
VPS13B-212ENST00000524330 DCAF16Q9NXF7 216 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 CACNG5Q9UF02 275 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 AMMECR1Q9Y4X0 333 aaPredicted RBP8.24□□□□□ -1.09
VPS13B-212ENST00000524330 SESN1Q9Y6P5 492 aa8.24□□□□□ -1.09
VPS13B-212ENST00000524330 PRRC2CQ9Y520 2896 aaKnown RBP8.23□□□□□ -1.09
VPS13B-212ENST00000524330 SYNGR2O43760 224 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 SSSCA1O60232 199 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 FCGR3BO75015 233 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 DFFBO76075 338 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 F12P00748 615 aaPredicted RBP8.23□□□□□ -1.09
VPS13B-212ENST00000524330 IGFBP2P18065 325 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 OMGP23515 440 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 GPR6P46095 362 aaPredicted RBP8.23□□□□□ -1.09
VPS13B-212ENST00000524330 GNG10P50151 68 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 EFNA4P52798 201 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 GNB2P62879 340 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 TLE4Q04727 773 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 ZNF816Q0VGE8 651 aaPredicted RBP8.23□□□□□ -1.09
VPS13B-212ENST00000524330 EIF4EBP1Q13541 118 aaPredicted RBP8.23□□□□□ -1.09
VPS13B-212ENST00000524330 ZNF585BQ52M93 769 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 PRAMEF5Q5TYX0 476 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 TMEM200BQ69YZ2 307 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 LYPD2Q6UXB3 125 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 BTNL3Q6UXE8 466 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 SLC25A48Q6ZT89 311 aaKnown RBP8.23□□□□□ -1.09
VPS13B-212ENST00000524330 TGIF2LYQ8IUE0 185 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 LINC00311Q8N616 119 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 OR10X1Q8NGY0 326 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 OR4A16Q8NH70 328 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 OR9G1Q8NH87 305 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 TMEM186Q96B77 213 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 R3HDM4Q96D70 268 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 SPOCK3Q9BQ16 436 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 AGMATQ9BSE5 352 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 IFI27L2Q9H2X8 130 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 C19orf12Q9NSK7 152 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 WSB1Q9Y6I7 421 aa8.23□□□□□ -1.09
VPS13B-212ENST00000524330 RAI1Q7Z5J4 1906 aaPredicted RBP8.23□□□□□ -1.09
VPS13B-212ENST00000524330 PITX3O75364 302 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 KRASP01116 189 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 LIPFP07098 398 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 SOD3P08294 240 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 ERVFRD-1P60508 538 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 POLR2GP62487 172 aaKnown RBP eCLIP8.22□□□□□ -1.09
VPS13B-212ENST00000524330 HBG1P69891 147 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 HBG2P69892 147 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 ZNF273Q14593 569 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 MIDNQ504T8 468 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 CT45A1Q5HYN5 189 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 OR2B11Q5JQS5 317 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 DUX4L9Q6RFH8 374 aaPredicted RBP8.22□□□□□ -1.09
VPS13B-212ENST00000524330 ZNF439Q8NDP4 499 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 CT45A3Q8NHU0 189 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 RNF141Q8WVD5 230 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 SMIM8Q96KF7 97 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 FAM210AQ96ND0 272 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 GPHA2Q96T91 129 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 LYRM2Q9NU23 88 aaPredicted RBP8.22□□□□□ -1.09
VPS13B-212ENST00000524330 CACNA1DQ01668 2161 aa8.22□□□□□ -1.09
VPS13B-212ENST00000524330 DIDO1Q9BTC0 2240 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms