RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 NAP1L6A6NFF2 107 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 H3BN98 237 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 ZNF593O00488 134 aaPredicted RBP3.67□□□□□ -1.82
SKP1-213ENST00000524288 UBL3O95164 117 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 MPC2O95563 127 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 PAHP00439 452 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 IGHV1-8P0DP01 117 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 DTYMKP23919 212 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 CD79BP40259 229 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 PPICP45877 212 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 OMPP47874 163 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 TAS2R43P59537 309 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 SNRPD2P62316 118 aaKnown RBP3.67□□□□□ -1.82
SKP1-213ENST00000524288 PAFAH1B2P68402 229 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 SYCNQ0VAF6 134 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 FUT5Q11128 374 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 SLAQ13239 276 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 GNA13Q14344 377 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 IRF4Q15306 451 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 STK11Q15831 433 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 GRK1Q15835 563 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 CCSMST1Q4G0I0 132 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 ZNF322Q6U7Q0 402 aaPredicted RBP3.67□□□□□ -1.82
SKP1-213ENST00000524288 Q6ZR03 302 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 RTL4Q6ZR62 310 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 LINC00336Q6ZUF6 198 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 COMTD1Q86VU5 262 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 COMMD7Q86VX2 200 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 OR5AK3PQ8NH89 298 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 RPS4Y2Q8TD47 263 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 ZNF431Q8TF32 576 aaPredicted RBP3.67□□□□□ -1.82
SKP1-213ENST00000524288 SMIM4Q8WVI0 70 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 ASB13Q8WXK3 278 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 YIPF5Q969M3 257 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 TMEM159Q96B96 161 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 SLC35G5Q96KT7 338 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 FOPNLQ96NB1 174 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 RBP7Q96R05 134 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 MS4A8Q9BY19 250 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 PLA2G12AQ9BZM1 189 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 ABCG5Q9H222 651 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 RPP21Q9H633 154 aaKnown RBP3.67□□□□□ -1.82
SKP1-213ENST00000524288 TMEM27Q9HBJ8 222 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 IL20Q9NYY1 176 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 TVP23BQ9NYZ1 205 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 MAT2BQ9NZL9 334 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 COMMD3Q9UBI1 195 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 COL5A1P20908 1838 aaPredicted RBP3.67□□□□□ -1.82
SKP1-213ENST00000524288 UTRNP46939 3433 aa3.67□□□□□ -1.82
SKP1-213ENST00000524288 A0A087WUU8 490 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 LINC00854A0A1B0GVQ3 168 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 KRBOX1C9JBD0 128 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 SMLR1H3BR10 107 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 I3L521 148 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 GPR171O14626 319 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 SLC16A7O60669 478 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 OR5F1O95221 314 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 TCRBP04435 133 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 IL5P05113 134 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 HMGN1P05114 100 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 IFI6P09912 130 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 RAB5AP20339 215 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 PTNP21246 168 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 F8A1P23610 371 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 CD70P32970 193 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 PFN2P35080 140 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 BMI1P35226 326 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 NUP62P37198 522 aaPredicted RBP3.66□□□□□ -1.82
SKP1-213ENST00000524288 INPP1P49441 399 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 CAV3P56539 151 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 CTBP2P56545 445 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 PITPNAQ00169 270 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 KIR2DS1Q14954 304 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 LGALSLQ3ZCW2 172 aaPredicted RBP3.66□□□□□ -1.82
SKP1-213ENST00000524288 BCL2L15Q5TBC7 163 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 KHDRBS2Q5VWX1 349 aaKnown RBP3.66□□□□□ -1.82
SKP1-213ENST00000524288 SFXN4Q6P4A7 337 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 TNFAIP8L2Q6P589 184 aaPredicted RBP3.66□□□□□ -1.82
SKP1-213ENST00000524288 WDR82Q6UXN9 313 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 RBM45Q8IUH3 476 aaKnown RBP3.66□□□□□ -1.82
SKP1-213ENST00000524288 OR10W1Q8NGF6 305 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 OR10Z1Q8NGY1 313 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 OR6K2Q8NGY2 324 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 OR2T4Q8NH00 348 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 OR8U1Q8NH10 309 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 ZNF461Q8TAF7 563 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 PIGXQ8TBF5 258 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 C15orf40Q8WUR7 153 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 SKA2Q8WVK7 121 aaPredicted RBP3.66□□□□□ -1.82
SKP1-213ENST00000524288 TFGQ92734 400 aaPredicted RBP3.66□□□□□ -1.82
SKP1-213ENST00000524288 RBPMSQ93062 196 aaKnown RBP3.66□□□□□ -1.82
SKP1-213ENST00000524288 ZNF514Q96K75 400 aaPredicted RBP3.66□□□□□ -1.82
SKP1-213ENST00000524288 WFDC6Q9BQY6 131 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 IMP3Q9NV31 184 aaKnown RBP3.66□□□□□ -1.82
SKP1-213ENST00000524288 CALML5Q9NZT1 146 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 ABRACLQ9P1F3 81 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 KLK12Q9UKR0 248 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 PSG11Q9UQ72 335 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 TMEM131Q92545 1883 aa3.66□□□□□ -1.82
SKP1-213ENST00000524288 CPAMD8Q8IZJ3 1885 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms