RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 RBM14Q96PK6 669 aaKnown RBP8.67□□□□□ -1.02
SPIDR-225ENST00000524141 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.67□□□□□ -1.02
SPIDR-225ENST00000524141 OCIAD1Q9NX40 245 aa8.67□□□□□ -1.02
SPIDR-225ENST00000524141 MRPS17Q9Y2R5 130 aaKnown RBP8.67□□□□□ -1.02
SPIDR-225ENST00000524141 MRPS18CQ9Y3D5 142 aaKnown RBP8.67□□□□□ -1.02
SPIDR-225ENST00000524141 MYO15AQ9UKN7 3530 aa8.67□□□□□ -1.02
SPIDR-225ENST00000524141 CACNA1EQ15878 2313 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 NCKAP5O14513 1909 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 IGKV3D-15A0A087WSY6 115 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 KLF7O75840 302 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-225ENST00000524141 IGHV3-9P01782 118 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 RPLP1P05386 114 aaKnown RBP8.66□□□□□ -1.02
SPIDR-225ENST00000524141 RELQ04864 619 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-225ENST00000524141 TXNDC17Q9BRA2 123 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 KCNIP2Q9NS61 270 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 A0A0G2JMM0 328 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 A0A1W2PPB8 328 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 A0A1W2PRS3 328 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 LRRC30A6NM36 301 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 KIR3DP1A8MWS1 328 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 J3QT63 122 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 TRAPPC6AO75865 159 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 ZNF25P17030 456 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-225ENST00000524141 EPHA8P29322 1005 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-225ENST00000524141 ARR3P36575 388 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 SOX8P57073 446 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 RANP62826 216 aaKnown RBP8.66□□□□□ -1.02
SPIDR-225ENST00000524141 PAFAH1B2P68402 229 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 GAGE1Q13065 139 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 WIPI1Q5MNZ9 446 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-225ENST00000524141 Q8IYB0 196 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 OR2Y1Q8NGV0 311 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 RAB1CQ92928 201 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 DIRC2Q96SL1 478 aa8.66□□□□□ -1.02
SPIDR-225ENST00000524141 LY6G6EA0A0G2JKS1 128 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 ZNF705FA8MVS1 300 aaPredicted RBP8.65□□□□□ -1.02
SPIDR-225ENST00000524141 C1QTNF9BB2RNN3 333 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 ZNF705DP0CH99 300 aaPredicted RBP8.65□□□□□ -1.02
SPIDR-225ENST00000524141 ZNF705BP0CI00 300 aaPredicted RBP8.65□□□□□ -1.02
SPIDR-225ENST00000524141 CCL2P13500 99 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 MPLP40238 635 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 TPPP2P59282 170 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 PMP22Q01453 160 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 CATR1Q13166 79 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 Q6P435 159 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 SLC23A3Q6PIS1 610 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 ZNF645Q8N7E2 425 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 OR5T1Q8NG75 326 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 CMTM2Q8TAZ6 248 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 DTD1Q8TEA8 209 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 C20orf144Q9BQM9 153 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 PRDM6Q9NQX0 595 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 MBNL3Q9NUK0 354 aaKnown RBP8.65□□□□□ -1.02
SPIDR-225ENST00000524141 U3KQA8 63 aa8.65□□□□□ -1.02
SPIDR-225ENST00000524141 TRIOO75962 3097 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 TRAV9-1A0A075B6T8 112 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 A0A096LPE4 126 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 MDFIC2A0A1B0GVS7 189 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 A0A1W2PPZ6 126 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 PMS2P5A8MQ11 134 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 LILRA1O75019 489 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 HPRT1P00492 218 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 P0C879 139 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 OR3A1P47881 315 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 RPL29P47914 159 aaKnown RBP8.65□□□□□ -1.03
SPIDR-225ENST00000524141 YPEL3P61236 119 aaPredicted RBP8.65□□□□□ -1.03
SPIDR-225ENST00000524141 PLP2Q04941 152 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 TFF3Q07654 80 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 PRSS8Q16651 343 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 SFRP2Q96HF1 295 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 TBX15Q96SF7 602 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 CLN8Q9UBY8 286 aa8.65□□□□□ -1.03
SPIDR-225ENST00000524141 RFPL3SP0C7P2 107 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 RAC2P15153 192 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 NPPCP23582 126 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 GDF1P27539 372 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 GCH1P30793 250 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 TMEM256Q8N2U0 113 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 TCTEX1D1Q8N7M0 179 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 SGMS2Q8NHU3 365 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 GMPPAQ96IJ6 420 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-225ENST00000524141 POM121L2Q96KW2 1035 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 TMEM106BQ9NUM4 274 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 ELOVL5Q9NYP7 299 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 ODAMA1E959 279 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 MARCH11A6NNE9 402 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 DLEU1O43261 78 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 KRASP01116 189 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 NGFP01138 241 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 SFTPCP11686 197 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 SELENOTP62341 195 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 GNB1P62873 340 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 TMEM183BQ1AE95 376 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 CST9LP1Q5W188 147 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 ZNF705AQ6ZN79 300 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-225ENST00000524141 MIEN1Q9BRT3 115 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 PRRG4Q9BZD6 226 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 POLDIP2Q9Y2S7 368 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 WIPI2Q9Y4P8 454 aa8.64□□□□□ -1.03
SPIDR-225ENST00000524141 ESPL1Q14674 2120 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms