RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 IDNKQ5T6J7 187 aa5.09□□□□□ -1.59
SDCBP-210ENST00000522843 ACP7Q6ZNF0 438 aa5.09□□□□□ -1.59
SDCBP-210ENST00000522843 STPG2Q8N412 459 aa5.09□□□□□ -1.59
SDCBP-210ENST00000522843 FAM71E2Q8N5Q1 922 aa5.09□□□□□ -1.59
SDCBP-210ENST00000522843 DNAAF1Q8NEP3 725 aa5.09□□□□□ -1.59
SDCBP-210ENST00000522843 OR6M1Q8NGM8 313 aa5.09□□□□□ -1.59
SDCBP-210ENST00000522843 OR13C3Q8NGS6 347 aa5.09□□□□□ -1.59
SDCBP-210ENST00000522843 DAZAP1Q96EP5 407 aaKnown RBP5.09□□□□□ -1.59
SDCBP-210ENST00000522843 SDHCQ99643 169 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-210ENST00000522843 RTL8AQ9BWD3 113 aa5.09□□□□□ -1.59
SDCBP-210ENST00000522843 CHST5Q9GZS9 411 aa5.09□□□□□ -1.59
SDCBP-210ENST00000522843 C6orf62Q9GZU0 229 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-210ENST00000522843 OR51I2Q9H344 312 aa5.09□□□□□ -1.59
SDCBP-210ENST00000522843 DAPK2Q9UIK4 370 aa5.09□□□□□ -1.59
SDCBP-210ENST00000522843 V9GYH0 126 aa5.09□□□□□ -1.59
SDCBP-210ENST00000522843 LRP1BQ9NZR2 4599 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 IGKV1-9A0A0C4DH69 117 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 FAM90A20PA6NIJ5 464 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 SERPINE3A8MV23 424 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 FAM90A12PA8MX19 464 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 DEDDO75618 318 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 UPK1BO75841 260 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 HLA-DQB1P01920 261 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 FAM90A13PP0C7W8 464 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 FAM90A24PP0C7X0 464 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 UBBP0CG47 229 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 ELK1P19419 428 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 PRKACBP22694 351 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 CNTFRP26992 372 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 HTR1DP28221 377 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 HTR2CP28335 458 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 INSL3P51460 131 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 GPM6AP51674 278 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 IFITM3Q01628 133 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 ZNF79Q15937 498 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 CLVS2Q5SYC1 327 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 HACD4Q5VWC8 232 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 CCDC144NLQ6NUI1 221 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 LAX1Q8IWV1 398 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 BATF2Q8N1L9 274 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 ZNF561Q8N587 486 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 FAM89BQ8N5H3 189 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 COMMD1Q8N668 190 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 DRAM1Q8N682 238 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 C5orf56Q8N8D9 126 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 CSNK2A3Q8NEV1 391 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 OR11H1Q8NG94 326 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 TSEN15Q8WW01 171 aaKnown RBP5.08□□□□□ -1.6
SDCBP-210ENST00000522843 CAPSLQ8WWF8 208 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 AQP3Q92482 292 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 SPSB1Q96BD6 273 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 FAM3DQ96BQ1 224 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 ORAI1Q96D31 301 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 S100A16Q96FQ6 103 aaKnown RBP5.08□□□□□ -1.6
SDCBP-210ENST00000522843 DIRAS2Q96HU8 199 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 RNF170Q96K19 258 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 FAM110AQ9BQ89 295 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 SRRQ9GZT4 340 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 TMEM133Q9H2Q1 129 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 NEK6Q9HC98 313 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 TAS2R4Q9NYW5 299 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 DPM3Q9P2X0 92 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 COMMD3Q9UBI1 195 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 RAB22AQ9UL26 194 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 MOB4Q9Y3A3 225 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 MPC1Q9Y5U8 109 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 SESN1Q9Y6P5 492 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 KIAA2026Q5HYC2 2103 aa5.08□□□□□ -1.6
SDCBP-210ENST00000522843 ANXA2P2A6NMY6 339 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 TMEM14DPA8MWL7 114 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 ZNF732B4DXR9 585 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 LY6LH3BQJ8 138 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 H3BSH0 61 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 K7N7A8 449 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 M0QZK8 103 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 RGS5O15539 181 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 XRCC3O43542 346 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 GSTZ1O43708 216 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-210ENST00000522843 SLC25A17O43808 307 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 HPGDSO60760 199 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 ZNF737O75373 536 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 SCGNO76038 276 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 SCGB1D1O95968 90 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 IGLV1-47P01700 117 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 IGHG2P01859 326 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 MAS1P04201 325 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 SLC2A2P11168 524 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-210ENST00000522843 BRS3P32247 399 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 FUT6P51993 359 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 MRPS10P82664 201 aaKnown RBP5.07□□□□□ -1.6
SDCBP-210ENST00000522843 PITPNAQ00169 270 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 CFHR3Q02985 330 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 KIAA0141Q14154 515 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-210ENST00000522843 UBE2V2Q15819 145 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 ODF4Q2M2E3 257 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 UBE2NLQ5JXB2 153 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 PYHIN1Q6K0P9 492 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 FAM53AQ6NSI3 398 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-210ENST00000522843 TEX38Q6PEX7 206 aa5.07□□□□□ -1.6
SDCBP-210ENST00000522843 TMEM88Q6PEY1 159 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms