RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 CREBL2O60519 120 aaPredicted RBP10.65□□□□□ -0.7
CPNE3-205ENST00000522240 B3GALNT1O75752 331 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 TOX4O94842 621 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 IGLV1-47P01700 117 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 HLA-AP01891 365 aaKnown RBP10.65□□□□□ -0.7
CPNE3-205ENST00000522240 IGHV4-31P0DP07 118 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 HOXB4P17483 251 aaPredicted RBP10.65□□□□□ -0.7
CPNE3-205ENST00000522240 AKR1C4P17516 323 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 IL3RAP26951 378 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 ZNF134P52741 427 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 PAX8Q06710 450 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 DHRS2Q13268 280 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 PPP1R1AQ13522 171 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 EIF4EBP1Q13541 118 aaPredicted RBP10.65□□□□□ -0.7
CPNE3-205ENST00000522240 HLA-DRB5Q30154 266 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 C4orf46Q504U0 113 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 PHLDA2Q53GA4 152 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 UTF1Q5T230 341 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 ZNF626Q68DY1 528 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 KCTD9Q7L273 389 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 VMO1Q7Z5L0 202 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 LYG2Q86SG7 212 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 SGPP2Q8IWX5 399 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 ODF3L1Q8IXM7 274 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 WFDC11Q8NEX6 87 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 OR11H6Q8NGC7 330 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 CAPSLQ8WWF8 208 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 RTN4IP1Q8WWV3 396 aaPredicted RBP10.65□□□□□ -0.7
CPNE3-205ENST00000522240 TMEM186Q96B77 213 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 GALNT14Q96FL9 552 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 ABHD14BQ96IU4 210 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 SIRT7Q9NRC8 400 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 SDHAF2Q9NX18 166 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 ALG5Q9Y673 324 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 CR1P17927 2039 aa10.65□□□□□ -0.71
CPNE3-205ENST00000522240 SAA2-SAA4A0A096LPE2 208 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 C9orf170A2RU37 121 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 ODF3BA8MYP8 253 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 TOR1AO14656 332 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 SFT2D2O95562 160 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 IGHV3-7P01780 117 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 SAA2P0DJI9 122 aaPredicted RBP10.64□□□□□ -0.71
CPNE3-205ENST00000522240 PRRX1P54821 245 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 SUPT4H1P63272 117 aaKnown RBP10.64□□□□□ -0.71
CPNE3-205ENST00000522240 CATR1Q13166 79 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 TMEM249Q2WGJ8 235 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 DCAF12L2Q5VW00 463 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 ZNF66Q6ZN08 573 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 TBC1D26Q86UD7 250 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 LYG1Q8N1E2 194 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 TCTEX1D1Q8N7M0 179 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 OR10X1Q8NGY0 326 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 ZNF431Q8TF32 576 aaPredicted RBP10.64□□□□□ -0.71
CPNE3-205ENST00000522240 C5orf30Q96GV9 206 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 TBX15Q96SF7 602 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 HSD17B10Q99714 261 aaKnown RBP10.64□□□□□ -0.71
CPNE3-205ENST00000522240 SEC22CQ9BRL7 303 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 BEX2Q9BXY8 128 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 BEX1Q9HBH7 125 aa10.64□□□□□ -0.71
CPNE3-205ENST00000522240 LIN7CQ9NUP9 197 aaKnown RBP10.64□□□□□ -0.71
CPNE3-205ENST00000522240 A0A0A6YYJ9 748 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 TEX13DA0A0J9YY54 714 aaPredicted RBP10.63□□□□□ -0.71
CPNE3-205ENST00000522240 A0A1B0GVG6 124 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 A0A1W2PPE3 182 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 H0Y980 276 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 J3QLI3 93 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 MPPED1O15442 326 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 PGLYRP1O75594 196 aaPredicted RBP10.63□□□□□ -0.71
CPNE3-205ENST00000522240 DUS4LO95620 317 aaKnown RBP10.63□□□□□ -0.71
CPNE3-205ENST00000522240 ANXA3P12429 323 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 COX7A1P24310 79 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 HCP5Q6MZN7 132 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 ZNF833PQ6ZTB9 187 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 PNKDQ8N490 385 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 MSI2Q96DH6 328 aaKnown RBP10.63□□□□□ -0.71
CPNE3-205ENST00000522240 ADTRPQ96IZ2 230 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 S1PR3Q99500 378 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 ZNF251Q9BRH9 671 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 OR51J1Q9H342 316 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 FAM212BQ9NTI7 297 aaPredicted RBP10.63□□□□□ -0.71
CPNE3-205ENST00000522240 HIF1ANQ9NWT6 349 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 RNF150Q9ULK6 438 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 KCNIP3Q9Y2W7 256 aa10.63□□□□□ -0.71
CPNE3-205ENST00000522240 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.62□□□□□ -0.716e-10■□□□□ 10.9
CPNE3-205ENST00000522240 A0A0B4J2A0 478 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 PIGBOS1A0A0B4J2F0 54 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 C3orf85A0A1B0GTC6 90 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 VGLL3A8MV65 326 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 TXNL1O43396 289 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 TNFSF12O43508 249 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 IFNA2P01563 188 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 F2RP25116 425 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 SRPXP78539 464 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 CBX3Q13185 183 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 KLRD1Q13241 179 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 OR52B4Q8NGK2 314 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 OR4P4Q8NGL7 312 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 MITD1Q8WV92 249 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 ST6GALNAC6Q969X2 333 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 PCGF1Q9BSM1 259 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms