RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 SNX3O60493 162 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 PRH1P02810 166 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 CD74P04233 296 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 IGKV1-16P04430 117 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 APELAP0DMC3 54 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 P0DMU3 169 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 FAM231AP0DMU4 169 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 FAM231CP0DMU5 169 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 ZNF20P17024 532 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 HLA-DMBP28068 263 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 ACTR3P61158 418 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 ANKRD55Q3KP44 614 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 SYT6Q5T7P8 510 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 BTNL8Q6UX41 500 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 ASCL4Q6XD76 172 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 ADAD2Q8NCV1 583 aaKnown RBP6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 PXT1Q8NFP0 134 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 OR10G2Q8NGC3 310 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 C18orf15Q96N68 181 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 ADI1Q9BV57 179 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 RNF126Q9BV68 326 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 HRH4Q9H3N8 390 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 OR2S2Q9NQN1 319 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 RAB21Q9UL25 225 aa6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 SAMHD1Q9Y3Z3 626 aaKnown RBP6.41□□□□□ -1.38
TRAPPC9-212ENST00000521944 TRBV9A0A0B4J1U6 114 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 METTL15A6NJ78 407 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 AIPO00170 330 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 NDUFAB1O14561 156 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 GEMIN2O14893 280 aaKnown RBP6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 SLC22A1O15245 554 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 SPINT2O43291 252 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 PRKYO43930 277 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 PROP1O75360 226 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 OR7C1O76099 320 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 CRYGBP07316 175 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 NANOS3P60323 173 aaKnown RBP6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 RHOGP84095 191 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 RIPK1Q13546 671 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 GK3PQ14409 553 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 ICAM4Q14773 271 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 RPL39P5Q59GN2 51 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 ZNF691Q5VV52 312 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 GPHB5Q86YW7 130 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 GAPTQ8N292 157 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 OR2C3Q8N628 320 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 Q8NAQ8 132 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 OR1L6Q8NGR2 347 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 OR4K15Q8NH41 348 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 TBX5Q99593 518 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 CSTL1Q9H114 145 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 EFCAB1Q9HAE3 211 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 ST3GAL6Q9Y274 331 aa6.4□□□□□ -1.38
TRAPPC9-212ENST00000521944 ZNF670-ZNF695F2Z2N8 137 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 H3BNX3 289 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 M0R129 80 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 GABRPO00591 440 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 GMNNO75496 209 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 IGLV2-23P01705 113 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 AMBPP02760 352 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 ISG15P05161 165 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 KRT8P05787 483 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 UBCP0CG48 685 aaKnown RBP6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 C8orf88P0DMB2 117 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 HSD17B1P14061 328 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 EFNB1P98172 346 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 EXOSC2Q13868 293 aaKnown RBP6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 NHLRC3Q5JS37 347 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 AADACL4Q5VUY2 407 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 OR2T5Q6IEZ7 315 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 OR2G2Q8NGZ5 317 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 OR2T29Q8NH02 315 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 DYDC1Q8WWB3 177 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 FAM46BQ96A09 425 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 SLC7A6OSQ96CW6 309 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 MRPS24Q96EL2 167 aaKnown RBP6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 NSMCE2Q96MF7 247 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 RNF5Q99942 180 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 CHRDL1Q9BU40 450 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 TAF9BQ9HBM6 251 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 MRGBPQ9NV56 204 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 COA4Q9NYJ1 87 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 TVP23BQ9NYZ1 205 aa6.39□□□□□ -1.39
TRAPPC9-212ENST00000521944 TRAV10A0A0B4J240 114 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 TRAV25A0A0B4J276 109 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 OR5H14A6NHG9 310 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 A8MWP6 167 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 SULT1B1O43704 296 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 RBBP9O75884 186 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 SULT1C4O75897 302 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 CDRT1O95170 752 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 OSMP13725 252 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 GYS2P54840 703 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 RBM11P57052 281 aaKnown RBP6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 KRTAP10-2P60368 255 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 RPS16P62249 146 aaKnown RBP6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 TMEM30BQ3MIR4 351 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 SOHLH1Q5JUK2 328 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 LY6G6FQ5SQ64 297 aa6.38□□□□□ -1.39
TRAPPC9-212ENST00000521944 TMEM244Q5VVB8 128 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms