RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SDHAF4Q5VUM1 108 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 SAMD13Q5VXD3 122 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 GLYATQ6IB77 296 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 H3F3CQ6NXT2 135 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 TMEM220Q6QAJ8 160 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 FAM131AQ6UXB0 335 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 SCD5Q86SK9 330 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 CALHM3Q86XJ0 350 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 FUNDC1Q8IVP5 155 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 CPNE9Q8IYJ1 553 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 TMEM156Q8N614 296 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 MIR7-3HGQ8N6C7 128 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 ZNF645Q8N7E2 425 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 TMEM105Q8N8V8 129 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 OR8D4Q8NGM9 314 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 OR13C8Q8NGS7 320 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 OR2T4Q8NH00 348 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 ZNF431Q8TF32 576 aaPredicted RBP2.68□□□□□ -1.98
SKP1-208ENST00000521216 CASTOR1Q8WTX7 329 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 TMEM239Q8WW34 195 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 DNAJB3Q8WWF6 145 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 CYGBQ8WWM9 190 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 ROPN1LQ96C74 230 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 C8orf44Q96CB5 159 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 RCN3Q96D15 328 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 DYNLL2Q96FJ2 89 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 ERMAPQ96PL5 475 aaPredicted RBP2.68□□□□□ -1.98
SKP1-208ENST00000521216 THTPAQ9BU02 230 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 TMEM243Q9BU79 118 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 OR2AG1Q9H205 316 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 PLEKHJ1Q9NW61 149 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 FBXL3Q9UKT7 428 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 SLC35A3Q9Y2D2 325 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 CARHSP1Q9Y2V2 147 aaKnown RBP2.68□□□□□ -1.98
SKP1-208ENST00000521216 CFTRP13569 1480 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 LAMB4A4D0S4 1761 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 NALCNQ8IZF0 1738 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 ARHGEF28Q8N1W1 1705 aaKnown RBP2.68□□□□□ -1.98
SKP1-208ENST00000521216 NESP48681 1621 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 NFAT5O94916 1531 aa2.68□□□□□ -1.98
SKP1-208ENST00000521216 URB2Q14146 1524 aaKnown RBP2.68□□□□□ -1.98
SKP1-208ENST00000521216 CHD5Q8TDI0 1954 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 FLT4P35916 1363 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 A0A087WUJ7 227 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 CLDN24A6NM45 220 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 E7EWF7 191 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 F6UZH7 168 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 MYL12BO14950 172 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 MT-CO2P00403 227 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 HPRT1P00492 218 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 IGHV3-11P01762 117 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 APOC3P02656 99 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 C1QCP02747 245 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 CD2P06729 351 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 PET100P0DJ07 73 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 SPNP16150 400 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 MYL12AP19105 171 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 RPS3P23396 243 aaKnown RBP eCLIP2.67□□□□□ -1.982e-11■■□□□ 12.7
SKP1-208ENST00000521216 MYL9P24844 172 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 S100GP29377 79 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 KDELR2P33947 212 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 NDUFA8P51970 172 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 ZNF121P58317 390 aaPredicted RBP2.67□□□□□ -1.98
SKP1-208ENST00000521216 HBA1P69905 142 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 CAV1Q03135 178 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 PEA15Q15121 130 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 RSU1Q15404 277 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 MAPK14Q16539 360 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 LRRC26Q2I0M4 334 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 ZNF404Q494X3 552 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 SCGB2B2Q4G0G5 96 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 AKR1C8PQ5T2L2 129 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 SLC36A1Q7Z2H8 476 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 TRAPPC5Q8IUR0 188 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 PDZD9Q8IXQ8 264 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 UBAC2Q8NBM4 344 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 OR4E2Q8NGC2 313 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 OR13C4Q8NGS5 318 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 OR10K1Q8NGX5 313 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 OR6K3Q8NGY3 331 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 OR5AK3PQ8NH89 298 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 MCFD2Q8NI22 146 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 SPPL2BQ8TCT7 592 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 RNASEH2CQ8TDP1 164 aaKnown RBP2.67□□□□□ -1.98
SKP1-208ENST00000521216 SKA2Q8WVK7 121 aaPredicted RBP2.67□□□□□ -1.98
SKP1-208ENST00000521216 RORBQ92753 470 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 PTH2Q96A98 100 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 ISOC2Q96AB3 205 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 TMEM159Q96B96 161 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 MRPS24Q96EL2 167 aaKnown RBP2.67□□□□□ -1.98
SKP1-208ENST00000521216 SMARCD1Q96GM5 515 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 CPB2Q96IY4 423 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 RBP7Q96R05 134 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 OR7D2Q96RA2 312 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 S100A13Q99584 98 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 GINS4Q9BRT9 223 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 SNHG12Q9BXW3 62 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 SAMD10Q9BYL1 202 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 TLNRD1Q9H1K6 362 aa2.67□□□□□ -1.98
SKP1-208ENST00000521216 LYRM4Q9HD34 91 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms