RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 ZNF426Q9BUY5 554 aa1.08□□□□□ -2.24
SKP1-207ENST00000520417 UBQLN4Q9NRR5 601 aa1.08□□□□□ -2.24
SKP1-207ENST00000520417 GMEB1Q9Y692 573 aa1.08□□□□□ -2.24
SKP1-207ENST00000520417 DOCK10Q96BY6 2186 aa1.08□□□□□ -2.24
SKP1-207ENST00000520417 ZNF638Q14966 1978 aaKnown RBP1.08□□□□□ -2.24
SKP1-207ENST00000520417 CLUHO75153 1309 aa1.08□□□□□ -2.24
SKP1-207ENST00000520417 LRPPRCP42704 1394 aaKnown RBP1.08□□□□□ -2.24
SKP1-207ENST00000520417 RTEL1-TNFRSF6BF6WH68 1400 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 IGKV2-29A2NJV5 120 aaPredicted RBP1.07□□□□□ -2.24
SKP1-207ENST00000520417 FABP12A6NFH5 140 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 GOLGA6L10A6NI86 522 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 C2orf74A8MZ97 194 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 MKRN2OSH3BPM6 223 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 SLC17A3O00476 420 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 COPEO14579 308 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 GSTZ1O43708 216 aaPredicted RBP1.07□□□□□ -2.24
SKP1-207ENST00000520417 IGLV3-27P01718 113 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 CRYBA1P05813 215 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 TPM3P06753 285 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 CRATP43155 626 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 CA7P43166 264 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 CD151P48509 253 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 LINC00313P59037 77 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 UBE2G2P60604 165 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 HERVK_113P63121 156 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 TPM4P67936 248 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 ERHP84090 104 aaKnown RBP1.07□□□□□ -2.24
SKP1-207ENST00000520417 SLAMF1Q13291 335 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 UAP1Q16222 522 aaPredicted RBP1.07□□□□□ -2.24
SKP1-207ENST00000520417 HSP90B2PQ58FF3 399 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 MESTQ5EB52 335 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 SPATA31B1PQ5VZV4 182 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 FAM45BPQ6NSW5 357 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 BLIDQ8IZY5 108 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 OR52E4Q8NGH9 312 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 TLCD1Q96CP7 247 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 ZNF625Q96I27 306 aaPredicted RBP1.07□□□□□ -2.24
SKP1-207ENST00000520417 UPF3BQ9BZI7 483 aaKnown RBP1.07□□□□□ -2.24
SKP1-207ENST00000520417 NKX6-2Q9C056 277 aaPredicted RBP1.07□□□□□ -2.24
SKP1-207ENST00000520417 SLC2A9Q9NRM0 540 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 ZNHIT6Q9NWK9 470 aaKnown RBP1.07□□□□□ -2.24
SKP1-207ENST00000520417 MYO5BQ9ULV0 1848 aa1.07□□□□□ -2.24
SKP1-207ENST00000520417 CACNA1SQ13698 1873 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 IQCF5A8MTL0 148 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 OR11H12B2RN74 326 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 GOLGA8RI6L899 631 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 CETN3O15182 167 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 TOX3O15405 576 aaPredicted RBP1.06□□□□□ -2.24
SKP1-207ENST00000520417 BRI3O95415 125 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 YEATS4O95619 227 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 IGHV1-69P01742 117 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 OCMP0CE72 109 aaPredicted RBP1.06□□□□□ -2.24
SKP1-207ENST00000520417 CRYBB3P26998 211 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 CD40LGP29965 261 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 DAPP51397 102 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 RAP1GDS1P52306 607 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.06□□□□□ -2.24
SKP1-207ENST00000520417 SDHAF4Q5VUM1 108 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 OR7G1Q8NGA0 311 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 OR2D3Q8NGH3 330 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 OR5L1Q8NGL2 311 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 OR11H2Q8NH07 326 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 LHFPL5Q8TAF8 219 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 DNAJB3Q8WWF6 145 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 RBP7Q96R05 134 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 ZNF471Q9BX82 626 aaPredicted RBP1.06□□□□□ -2.24
SKP1-207ENST00000520417 PARVAQ9NVD7 372 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 ADAMTS7Q9UKP4 1686 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 ATG2BQ96BY7 2078 aa1.06□□□□□ -2.24
SKP1-207ENST00000520417 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 TRPM6Q9BX84 2022 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 MPDZO75970 2070 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 TRAV8-1A0A0A6YYK1 113 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 C1orf232A0A0U1RR37 186 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 A0A1B0GVG6 124 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 MDFIC2A0A1B0GVS7 189 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 RFPL4AA6NLU0 287 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 OR5K4A6NMS3 321 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 RFPL4AL1F8VTS6 287 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 TXNDC9O14530 226 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 ATP8B1O43520 1251 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 STX10O60499 249 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 ORM1P02763 201 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 LINC00614P0C842 121 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 CCL3P10147 92 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 UGT2B7P16662 529 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 RPL14P50914 215 aaKnown RBP1.05□□□□□ -2.24
SKP1-207ENST00000520417 EMP2P54851 167 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 H2BFSP57053 126 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 MAP3K7CLP57077 242 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 GNA12Q03113 381 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 ZNF90Q03938 601 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 TMEM267Q0VDI3 215 aaPredicted RBP1.05□□□□□ -2.24
SKP1-207ENST00000520417 LCN8Q6JVE9 175 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 DRAM2Q6UX65 266 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 SLC35E3Q7Z769 313 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 LHFPL1Q86WI0 220 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 FUNDC1Q8IVP5 155 aa1.05□□□□□ -2.24
SKP1-207ENST00000520417 BAP18Q8IXM2 172 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms