RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 TMEM50AO95807 157 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 IGKV3-15P01624 115 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 IGHV3-9P01782 118 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 HBE1P02100 147 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 HSPB1P04792 205 aaKnown RBP4.24□□□□□ -1.73
SDC2-204ENST00000519914 NDUFB7P17568 137 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 KITLGP21583 273 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 FGF7P21781 194 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 APOBEC3AP31941 199 aaPredicted RBP4.24□□□□□ -1.73
SDC2-204ENST00000519914 CDKN1BP46527 198 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 ID4P47928 161 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 CAMLGP49069 296 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 SULT1A1P50225 295 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 CASP6P55212 293 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 SRYQ05066 204 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 MRPL49Q13405 166 aaKnown RBP4.24□□□□□ -1.73
SDC2-204ENST00000519914 HABP2Q14520 560 aaPredicted RBP4.24□□□□□ -1.73
SDC2-204ENST00000519914 CLINT1Q14677 625 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 PDCD1Q15116 288 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 CXorf66Q5JRM2 361 aaPredicted RBP4.24□□□□□ -1.73
SDC2-204ENST00000519914 ZNF506Q5JVG8 444 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 TMEM88Q6PEY1 159 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 C16orf54Q6UWD8 224 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 MEX3BQ6ZN04 569 aaKnown RBP4.24□□□□□ -1.73
SDC2-204ENST00000519914 CENPVQ7Z7K6 275 aaPredicted RBP4.24□□□□□ -1.73
SDC2-204ENST00000519914 PIP4P1Q86T03 277 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 WDR86Q86TI4 376 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 MDP1Q86V88 176 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 TGIF2LXQ8IUE1 241 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 DEFB123Q8N688 67 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 BOLLQ8N9W6 283 aaKnown RBP4.24□□□□□ -1.73
SDC2-204ENST00000519914 ZNF383Q8NA42 475 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 OR2D3Q8NGH3 330 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 OR2G3Q8NGZ4 309 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 Q8TCH9 128 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 SECTM1Q8WVN6 248 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 MBD3L1Q8WWY6 194 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 RBMXL1Q96E39 390 aaKnown RBP4.24□□□□□ -1.73
SDC2-204ENST00000519914 ATP5SQ99766 215 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 PCGF1Q9BSM1 259 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 PSMG3Q9BT73 122 aaPredicted RBP4.24□□□□□ -1.73
SDC2-204ENST00000519914 ADAT1Q9BUB4 502 aaKnown RBP4.24□□□□□ -1.73
SDC2-204ENST00000519914 SMIM3Q9BZL3 60 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 SH3BGRL3Q9H299 93 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 OBP2BQ9NPH6 170 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 PLA2G3Q9NZ20 509 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 IL36RNQ9UBH0 155 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 IL17BQ9UHF5 180 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 RNF150Q9ULK6 438 aa4.24□□□□□ -1.73
SDC2-204ENST00000519914 A0A0G2JRQ6 117 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 C7orf77A4D0Y5 90 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 RNF212BA8MTL3 300 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 IFNL4K9M1U5 179 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 AQP7O14520 342 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 HSD17B6O14756 317 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 SCAF4O95104 1147 aaKnown RBP4.23□□□□□ -1.73
SDC2-204ENST00000519914 TNFSF15O95150 251 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 OR2H2O95918 312 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 IGKV1-39P01597 117 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 IGLV1-44P01699 117 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 IGKV1D-39P04432 117 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 CCL2P13500 99 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 HNF1AP20823 631 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 CCNOP22674 350 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 IGHV1-2P23083 117 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 NFYBP25208 207 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 PPP1CCP36873 323 aaKnown RBP4.23□□□□□ -1.73
SDC2-204ENST00000519914 TNFSF10P50591 281 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 DYNLT3P51808 116 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 PPP1CBP62140 327 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 ARF6P62330 175 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 RPL23AP62750 156 aaKnown RBP4.23□□□□□ -1.73
SDC2-204ENST00000519914 VAMP2P63027 116 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 TGFBR3Q03167 851 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 TGIF1Q15583 401 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 C21orf62-AS1Q17RA5 79 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 ZNF585BQ52M93 769 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 KHDC3LQ587J8 217 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 AWAT1Q58HT5 328 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 C9orf152Q5JTZ5 239 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 HES3Q5TGS1 186 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 SLC35E4Q6ICL7 350 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 OR2T2Q6IF00 324 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 LINC00696Q6ZRV3 163 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 Q6ZT83 130 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.23□□□□□ -1.73
SDC2-204ENST00000519914 Q8N1Y9 231 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 C17orf78Q8N4C9 275 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 SCCPDHQ8NBX0 429 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 OR10A7Q8NGE5 316 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 OR5C1Q8NGR4 320 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 OR1J1Q8NGS3 322 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 MRGPRDQ8TDS7 321 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 TNFRSF14Q92956 283 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 HIST1H2BAQ96A08 127 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 GPR146Q96CH1 333 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 SIRT7Q9NRC8 400 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 LIN7CQ9NUP9 197 aaKnown RBP4.23□□□□□ -1.73
SDC2-204ENST00000519914 TIMM9Q9Y5J7 89 aa4.23□□□□□ -1.73
SDC2-204ENST00000519914 USF3Q68DE3 2245 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms