RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 OR3A4PP47883 348 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 THBS3P49746 956 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 GTF2A1P52655 376 aaPredicted RBP2.28□□□□□ -2.04
MCF2-208ENST00000519895 ACTBP60709 375 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 LIPKQ5VXJ0 399 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 TEX45Q8NA69 505 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 TMEM229BQ8NBD8 167 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 OR51A4Q8NGJ6 313 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 OR1L6Q8NGR2 347 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 GPX8Q8TED1 209 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 GALMQ96C23 342 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 S100A16Q96FQ6 103 aaKnown RBP2.28□□□□□ -2.04
MCF2-208ENST00000519895 KIRREL1Q96J84 757 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 TBX5Q99593 518 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 CCL13Q99616 98 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 ZNF286AQ9HBT8 521 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 SLC35D1Q9NTN3 355 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 FZR1Q9UM11 496 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 PEX16Q9Y5Y5 336 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 MFSD2BA6NFX1 497 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 F8W735 103 aaPredicted RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 PSPNO60542 156 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 TSC22D2O75157 780 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ATG12O94817 140 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 HLA-DRB1P01911 266 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 CRYGBP07316 175 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 OCMP0CE72 109 aaPredicted RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 GSTT2BP0CG30 244 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 OR5H8P0DN80 308 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 FCGR2BP31994 310 aaPredicted RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 ADMP35318 185 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 DYRK1AQ13627 763 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ZNF273Q14593 569 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 MEF2DQ14814 521 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 MORN2Q502X0 79 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 PYHIN1Q6K0P9 492 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 FAHD2BQ6P2I3 314 aaPredicted RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 PUSL1Q8N0Z8 303 aaKnown RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 OR2K2Q8NGT1 345 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 DYNC2LI1Q8TCX1 351 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 FAHD2AQ96GK7 314 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 GPER1Q99527 375 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 HSD17B10Q99714 261 aaKnown RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 AUNIPQ9H7T9 357 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 BEX1Q9HBH7 125 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 C19orf12Q9NSK7 152 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ING3Q9NXR8 418 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ETAA1Q9NY74 926 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ZNF221Q9UK13 617 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ING4Q9UNL4 249 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 A0A0B4J2A0 478 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 CLPSL1A2RUU4 121 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 FAM229AH3BQW9 127 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 GABARAPH6UMI1 98 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 WNT9BO14905 357 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 RAB29O14966 203 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 PAGE4O60829 102 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 CDK2AP2O75956 126 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 DUS4LO95620 317 aaKnown RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 CLIC3O95833 236 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ELANEP08246 267 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 FCGR3AP08637 254 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 CD3GP09693 182 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 FAM106CPP0CH98 169 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ZBTB25P24278 435 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 PSMB6P28072 239 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 SRP14P37108 136 aaKnown RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 NPBWR2P48146 333 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 TMEM50BP56557 158 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 MADCAM1Q13477 382 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 GAMTQ14353 236 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 HERPUD1Q15011 391 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 IGSF11Q5DX21 431 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 OLFML2AQ68BL7 652 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 RBMS3Q6XE24 437 aaKnown RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 ZNF826PQ6ZT77 177 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 FAM219AQ8IW50 185 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 Q8N1X5 172 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 BPIFB2Q8N4F0 458 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 FAM216BQ8N7L0 139 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 OR2T10Q8NGZ9 312 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 OSR1Q8TAX0 266 aaPredicted RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 PLPPR1Q8TBJ4 325 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ASB13Q8WXK3 278 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 DGCR14Q96DF8 476 aaKnown RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 RAB3CQ96E17 227 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 MISP3Q96FF7 219 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ABHD14BQ96IU4 210 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 TSNAXQ99598 290 aaKnown RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 NPFFR1Q9GZQ6 430 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 RBFOX1Q9NWB1 397 aaKnown RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 RHBDL2Q9NX52 303 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 SIGLEC8Q9NYZ4 499 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 SHPKQ9UHJ6 478 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 MOB4Q9Y3A3 225 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 A0A0A6YYD4 124 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 PNMA8CA0A1B0GUJ8 204 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 SCO2A0A1W2PP80 73 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 A0A1W2PPI3 338 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 A0A1W2PRD5 423 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms