RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 B4DEV8 164 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 PROB1E7EW31 1015 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 PMCHP20382 165 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 LRP11Q86VZ4 500 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 OR4P4Q8NGL7 312 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 IMMP1LQ96LU5 166 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 ACACBO00763 2458 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 LRRK1Q38SD2 2015 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 IGHV3-21A0A0B4J1V1 117 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 NPIPB13A6NJU9 1138 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 NPIPB4C9JG80 1138 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 CD8AP01732 235 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 RBP4P02753 201 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 GZMHP20718 246 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 PNRC1Q12796 327 aaPredicted RBP10.04□□□□□ -0.8
SYNPO-204ENST00000519664 FGFRL1Q8N441 504 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 GMPPAQ96IJ6 420 aaPredicted RBP10.04□□□□□ -0.8
SYNPO-204ENST00000519664 FKBP11Q9NYL4 201 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 OR6C3Q9NZP0 311 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 NAT8BQ9UHF3 227 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 IGKV1D-8A0A087WSZ0 117 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 WNT9BO14905 357 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 PRDX2P32119 198 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 COL5A1-AS1Q5SY13 56 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 RTBDNQ9BSG5 229 aaPredicted RBP10.04□□□□□ -0.8
SYNPO-204ENST00000519664 ELOVL1Q9BW60 279 aa10.04□□□□□ -0.8
SYNPO-204ENST00000519664 PTPRQQ9UMZ3 2332 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 PLXNA3P51805 1871 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 NCBP2LA6PVI3 153 aaKnown RBP10.03□□□□□ -0.8
SYNPO-204ENST00000519664 SIAH2O43255 324 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 GYPAP02724 150 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 C10orf128Q5T292 105 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 MRPL14Q6P1L8 145 aaKnown RBP10.03□□□□□ -0.8
SYNPO-204ENST00000519664 SPNS3Q6ZMD2 512 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 POC1AQ8NBT0 407 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 MRPL30Q8TCC3 161 aaKnown RBP10.03□□□□□ -0.8
SYNPO-204ENST00000519664 GCGP01275 180 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 CAMPP49913 170 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 ZNF596Q8TC21 504 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 IL22RA2Q969J5 263 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 TMEM230Q96A57 120 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 CACFD1Q9UGQ2 172 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 GAPDHP04406 335 aaKnown RBP10.03□□□□□ -0.8
SYNPO-204ENST00000519664 CLEC3BP05452 202 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 MELTFP08582 738 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 OR10J1P30954 320 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 INO80CQ6PI98 192 aaPredicted RBP10.03□□□□□ -0.8
SYNPO-204ENST00000519664 OR10A7Q8NGE5 316 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 OR4S2Q8NH73 311 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 OR4C12Q96R67 309 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 GINS3Q9BRX5 216 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 VAX2Q9UIW0 290 aa10.03□□□□□ -0.8
SYNPO-204ENST00000519664 hADV38S2A0JD32 116 aa10.02□□□□□ -0.8
SYNPO-204ENST00000519664 PSG5Q15238 335 aa10.02□□□□□ -0.8
SYNPO-204ENST00000519664 VKORC1L1Q8N0U8 176 aa10.02□□□□□ -0.8
SYNPO-204ENST00000519664 CCL13Q99616 98 aa10.02□□□□□ -0.8
SYNPO-204ENST00000519664 KIAA1456Q9P272 454 aa10.02□□□□□ -0.8
SYNPO-204ENST00000519664 ONECUT1Q9UBC0 465 aa10.02□□□□□ -0.8
SYNPO-204ENST00000519664 MUC6Q6W4X9 2439 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 H0YIZ8 118 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 FCN1O00602 326 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 GLIPR1P48060 266 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 FOXG1P55316 489 aaPredicted RBP10.02□□□□□ -0.81
SYNPO-204ENST00000519664 SCGB2A2Q13296 93 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 TMEM187Q14656 261 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 SLC35E3Q7Z769 313 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 OR2T10Q8NGZ9 312 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 SMDT1Q9H4I9 107 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 GTF3C1Q12789 2109 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 CHEK1O14757 476 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 BET1LQ9NYM9 111 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 SERTM2A0A1B0GWG4 89 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 C5orf52A6NGY3 159 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 CYC1P08574 325 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 SLC35B1P78383 322 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 C5orf24Q7Z6I8 188 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 FGFBP3Q8TAT2 258 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 OR2V2Q96R30 315 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 SAP30LQ9HAJ7 183 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 FUT9Q9Y231 359 aa10.02□□□□□ -0.81
SYNPO-204ENST00000519664 PRR14LQ5THK1 2151 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 IGHV3-72A0A0B4J1Y9 119 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 PPIHO43447 177 aaKnown RBP10.01□□□□□ -0.81
SYNPO-204ENST00000519664 SYNGR3O43761 229 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 HSBP1O75506 76 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 CT45A10P0DMU9 189 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 SFTPCP11686 197 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 RHOBP62745 196 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 GNB2P62879 340 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 SELENOHQ8IZQ5 122 aaKnown RBP10.01□□□□□ -0.81
SYNPO-204ENST00000519664 KLF14Q8TD94 323 aaPredicted RBP10.01□□□□□ -0.81
SYNPO-204ENST00000519664 TMEM54Q969K7 222 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 RPEQ96AT9 228 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 ZNF524Q96C55 264 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 TRGC2P03986 189 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 FTH1P19P0C7X4 201 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 HIST1H1BP16401 226 aaKnown RBP10.01□□□□□ -0.81
SYNPO-204ENST00000519664 HOXA5P20719 270 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 CNN1P51911 297 aaKnown RBP10.01□□□□□ -0.81
SYNPO-204ENST00000519664 RND3P61587 244 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms