RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 PAX6P26367 422 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 PSMB6P28072 239 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 CRABP1P29762 137 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 OR3A4PP47883 348 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 CX3CR1P49238 355 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 ATP1B3P54709 279 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 CYCSP99999 105 aaKnown RBP3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 FMODQ06828 376 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 ENDOGQ14249 297 aaKnown RBP3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 SSX2Q16385 188 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 CDNFQ49AH0 187 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 GLYATL3Q5SZD4 288 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 HCP5Q6MZN7 132 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 SLC25A47Q6Q0C1 308 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 IL34Q6ZMJ4 242 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 Q6ZSR3 168 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 FOXL2NBQ6ZUU3 175 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 MRPL21Q7Z2W9 205 aaKnown RBP3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 LHFPL1Q86WI0 220 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 MKXQ8IYA7 352 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 FAM185AQ8N0U4 392 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 PUSL1Q8N0Z8 303 aaKnown RBP3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 FAM89BQ8N5H3 189 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 NKAIN3Q8N8D7 197 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 OR4D6Q8NGJ1 314 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 OR1S2Q8NGQ3 325 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 OR13D1Q8NGV5 346 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 OR8S1Q8NH09 359 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 OR1F12Q8NHA8 337 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 LYPD6BQ8NI32 183 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 LRRC29Q8WV35 223 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 PPP1R1CQ8WVI7 109 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 FAM46BQ96A09 425 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 SAT2Q96F10 170 aaPredicted RBP3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 SEC22AQ96IW7 307 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 SMIM8Q96KF7 97 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 UQCC2Q9BRT2 126 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 SEC11CQ9BY50 192 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 CST11Q9H112 138 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 SYT4Q9H2B2 425 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 TMEM138Q9NPI0 162 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 ZC4H2Q9NQZ6 224 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 TAS2R4Q9NYW5 299 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 TAS2R3Q9NYW6 316 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 COMMD9Q9P000 198 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 OR52A1Q9UKL2 312 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 HHLA2Q9UM44 414 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 KIAA1109Q2LD37 5005 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 HECTD4Q9Y4D8 3996 aa3.9□□□□□ -1.79
AC055854.1-202ENST00000519624 MEX3AA1L020 520 aaKnown RBP3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 MEIS3P1A6NDR6 274 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 NUPR2A6NF83 97 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 A6NIZ1 184 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 COLCA2A8K830 154 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 A8MZ25 164 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 H7C1C5 153 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 H7C2Y5 167 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 SLC16A7O60669 478 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 CA11O75493 328 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 SFT2D2O95562 160 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 CYB5AP00167 134 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 IGLV3-1P01715 115 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 IFNA4P05014 189 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 CD5P06127 495 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 SNRNP70P08621 437 aaKnown RBP3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 FCGR3AP08637 254 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 GSTP1P09211 210 aaKnown RBP3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 GP9P14770 177 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 CTLA4P16410 223 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 COX7A1P24310 79 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 CNTFRP26992 372 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 BDKRB2P30411 391 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 BRS3P32247 399 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 MAS1LP35410 378 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 RPS27P42677 84 aaKnown RBP3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 PRKXP51817 358 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 TMEM50BP56557 158 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 TAS2R31P59538 309 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 RAP1BP61224 184 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 LCN6P62502 163 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 RAP1AP62834 184 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 HOXA4Q00056 320 aaPredicted RBP3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 MFGE8Q08431 387 aaPredicted RBP3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 PJVKQ0ZLH3 352 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 UNC119Q13432 240 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 PPP1R1AQ13522 171 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 EIF2B1Q14232 305 aaKnown RBP3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 KIR2DS1Q14954 304 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 TAF13Q15543 124 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 KCNMB1Q16558 191 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 C9orf152Q5JTZ5 239 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 FAM74A1Q5RGS3 127 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 MINOS1Q5TGZ0 78 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 STUMQ69YW2 141 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 AWAT2Q6E213 333 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 PRSS54Q6PEW0 395 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 BTNL8Q6UX41 500 aa3.89□□□□□ -1.79
AC055854.1-202ENST00000519624 LCNL1Q6ZST4 164 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms