RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 DUX4L9Q6RFH8 374 aaPredicted RBP2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 RBMS3Q6XE24 437 aaKnown RBP2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 C1orf229Q6ZS94 237 aaPredicted RBP2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 ZNF695Q8IW36 515 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 IL22RA1Q8N6P7 574 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 FAM169BQ8N8A8 192 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 ZNF439Q8NDP4 499 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 DEFB124Q8NES8 71 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 OR1J1Q8NGS3 322 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 OR10J5Q8NHC4 309 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 NEK7Q8TDX7 302 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 C2CD4CQ8TF44 421 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 FAM222BQ8WU58 562 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 FAM216AQ8WUB2 273 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 MBD3L1Q8WWY6 194 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 ZDHHC16Q969W1 377 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 RAB39BQ96DA2 213 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 GNPNAT1Q96EK6 184 aaPredicted RBP2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 MEGF10Q96KG7 1140 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 RAB40CQ96S21 281 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 ZNF251Q9BRH9 671 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 DCTN5Q9BTE1 182 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 MRPL37Q9BZE1 423 aaKnown RBP2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 WDR61Q9GZS3 305 aaKnown RBP2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 SLC25A31Q9H0C2 315 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 SLC35B3Q9H1N7 401 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 RBKSQ9H477 322 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 SMDT1Q9H4I9 107 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 CDH20Q9HBT6 801 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 OBP2BQ9NPH6 170 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 ZNF71Q9NQZ8 489 aaPredicted RBP2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 SMCO4Q9NRQ5 59 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 RPRMQ9NS64 109 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 CISD1Q9NZ45 108 aaKnown RBP2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 METTL1Q9UBP6 276 aaKnown RBP2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 ERRFI1Q9UJM3 462 aaPredicted RBP2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 TINAGQ9UJW2 476 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 WASF3Q9UPY6 502 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 SSUH2Q9Y2M2 353 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 UBE2J1Q9Y385 318 aaPredicted RBP2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 TIMM9Q9Y5J7 89 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 ATRXP46100 2492 aa2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 MAP1BP46821 2468 aaKnown RBP2.7□□□□□ -1.98
SCARNA20.6-201ENST00000517251 CELSR1Q9NYQ6 3014 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 ABCA4P78363 2273 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 TRAV17A0A0B4J275 112 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 TRGV8A0A0C4DH27 118 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 IGHV3-64DA0A0J9YX35 117 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 A0A1B0GV50 99 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 MAP1LC3B2A6NCE7 125 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 RBFOX3A6NFN3 312 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 OOEPA6NGQ2 149 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 OR5H1A6NKK0 313 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 LRRC30A6NM36 301 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 FAM90A9PA6NNJ1 464 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 H3BQ15 152 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 H7C2Y5 167 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 K7EM74 188 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 IFNL4K9M1U5 179 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 WRBO00258 174 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 RAB29O14966 203 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 SLC31A2O15432 143 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 RBFOX2O43251 390 aaKnown RBP eCLIP2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 ZG16O60844 167 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 CLN5O75503 358 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 DFFBO76075 338 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 AGFG2O95081 481 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 CLDN14O95500 239 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 LHBP01229 141 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 MT-ND4LP03901 98 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 SNRNP70P08621 437 aaKnown RBP2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 FBP1P09467 338 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 RAB5AP20339 215 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 COL8A2P25067 703 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 DUTP33316 252 aaKnown RBP2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 GATA4P43694 442 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 VDAC2P45880 294 aaPredicted RBP2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 GLIPR1P48060 266 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 CD81P60033 236 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 HTD2P86397 168 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 COL10A1Q03692 680 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 TCF15Q12870 199 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 ELOBQ15370 118 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 POU2AF1Q16633 256 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 SMIM21Q3B7S5 101 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 Q3ZCU0 254 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 KHDC3LQ587J8 217 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 TMEM41BQ5BJD5 291 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 TMEM164Q5U3C3 297 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 WDR25Q64LD2 544 aaPredicted RBP2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 ZNF787Q6DD87 383 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 CDPF1Q6NVV7 123 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 ZNF474Q6S9Z5 364 aaPredicted RBP2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 IGFL3Q6UXB1 125 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 CYP2G1PQ6ZSU1 146 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 C22orf34Q6ZV56 151 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 P4HA3Q7Z4N8 544 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 SLC35E3Q7Z769 313 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 ZNF429Q86V71 674 aa2.69□□□□□ -1.98
SCARNA20.6-201ENST00000517251 LRP11Q86VZ4 500 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms