RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 APOA2P02652 100 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 GNAO1P09471 354 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 EGR2P11161 476 aaPredicted RBP11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 LYL1P12980 280 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 CPEP16870 476 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 ZBTB25P24278 435 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 HSD17B12Q53GQ0 312 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 RNLSQ5VYX0 342 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 LAIR2Q6ISS4 152 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 GLDNQ6ZMI3 551 aaPredicted RBP11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 BPIFB6Q8NFQ5 453 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 CASTOR1Q8WTX7 329 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 ABHD14BQ96IU4 210 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 AGMATQ9BSE5 352 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 NICN1Q9BSH3 213 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 TMED9Q9BVK6 235 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 PARP12Q9H0J9 701 aaKnown RBP11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 C12orf4Q9NQ89 552 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 FKBP14Q9NWM8 211 aa11.25□□□□□ -0.61
SCARNA20.5-201ENST00000516991 TRIM64CA6NLI5 447 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 H3BUA1 57 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 FCN1O00602 326 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 CA2P00918 260 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 IGHV3-11P01762 117 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 TRGV3P03979 118 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 CD37P11049 281 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 ZP3P21754 424 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 RANBP1P43487 201 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 QRFPP83859 136 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 INSL4Q14641 139 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 PSG5Q15238 335 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 PDPNQ86YL7 162 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 LFNGQ8NES3 379 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 PTX4Q96A99 478 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 RHOVQ96L33 236 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 C11orf54Q9H0W9 315 aaPredicted RBP11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 PALMDQ9NP74 551 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 AK3Q9UIJ7 227 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 ZNF221Q9UK13 617 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 GAB2Q9UQC2 676 aa11.24□□□□□ -0.61
SCARNA20.5-201ENST00000516991 CDK1P06493 297 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 UCHL1P09936 223 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 SRMP19623 302 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 CEACAM6P40199 344 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 RCN1Q15293 331 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 SPHARQ15513 63 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 SRSF7Q16629 238 aaKnown RBP eCLIP11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 MOGAT2Q3SYC2 334 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 CEACAM19Q7Z692 300 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 ANKRD13BQ86YJ7 626 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 MS4A10Q96PG2 267 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 CITED4Q96RK1 184 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 CLCC1Q96S66 551 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 FAM103A1Q9BTL3 118 aaKnown RBP11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 LPAR5Q9H1C0 372 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 VCXQ9H320 206 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 KCNK15Q9H427 330 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 OR1A1Q9P1Q5 309 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 HSF4Q9ULV5 492 aa11.23□□□□□ -0.61
SCARNA20.5-201ENST00000516991 HUWE1Q7Z6Z7 4374 aaKnown RBP11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 A0A0A6YYD4 124 aa11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 A0A0G2JLM5 398 aa11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 C13orf42A0A1B0GVH6 325 aa11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 LDLRAD4O15165 306 aa11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 SOCS1O15524 211 aa11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 IGLV1-51P01701 117 aa11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 RPS16P62249 146 aaKnown RBP11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 SGPP2Q8IWX5 399 aa11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 FAM89BQ8N5H3 189 aa11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 POC5Q8NA72 575 aa11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 GRPEL2Q8TAA5 225 aa11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 TM2D3Q9BRN9 247 aa11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 HDHD3Q9BSH5 251 aaPredicted RBP11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 PLGRKTQ9HBL7 147 aa11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 RANGRFQ9HD47 186 aaPredicted RBP11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 Q9N2K0 584 aa11.22□□□□□ -0.61
SCARNA20.5-201ENST00000516991 A8MZ25 164 aa11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 SLC17A2O00624 439 aa11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 SLC25A17O43808 307 aa11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 IGKV1-16P04430 117 aa11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 IGHV4-30-4P0DP06 118 aa11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 ARSBP15848 533 aa11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 SERPINB10P48595 397 aa11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 FXYD3Q14802 87 aa11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 OGFRL1Q5TC84 451 aaPredicted RBP11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 ZNF383Q8NA42 475 aa11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 DRAXINQ8NBI3 349 aaPredicted RBP11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 UFD1Q92890 307 aa11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 TMEM68Q96MH6 324 aa11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 RSRP1Q9BUV0 290 aa11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 ZNF355PQ9NSJ1 428 aa11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 SLC35D1Q9NTN3 355 aa11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 LSM2Q9Y333 95 aaKnown RBP11.21□□□□□ -0.61
SCARNA20.5-201ENST00000516991 ERICH4A6NGS2 130 aa11.2□□□□□ -0.62
SCARNA20.5-201ENST00000516991 M0R1X1 148 aa11.2□□□□□ -0.62
SCARNA20.5-201ENST00000516991 CASQ2O14958 399 aaPredicted RBP11.2□□□□□ -0.62
SCARNA20.5-201ENST00000516991 ARL6IP5O75915 188 aa11.2□□□□□ -0.62
SCARNA20.5-201ENST00000516991 SCTP09683 121 aa11.2□□□□□ -0.62
SCARNA20.5-201ENST00000516991 CBX3Q13185 183 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms