RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 PSMB3P49720 205 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 MEOX2P50222 304 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF83P51522 516 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF140P52738 457 aaPredicted RBP0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 DIO3P55073 304 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 MP68P56378 58 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 CTBP2P56545 445 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 WNT4P56705 351 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 PIGPP57054 158 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 DSCR10P59022 87 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 KRTAP10-5P60370 271 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 GABARAPL2P60520 117 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 NCALDP61601 193 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 TBPL1P62380 186 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 LCN6P62502 163 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 RPS28P62857 69 aaKnown RBP0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 DYNLL1P63167 89 aaKnown RBP0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 PSPHP78330 225 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 HOXC5Q00444 222 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 RUNX1Q01196 453 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 GNA12Q03113 381 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ATP5G2Q06055 141 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 FABP9Q0Z7S8 132 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 PRDX4Q13162 271 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ERCC8Q13216 396 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 DHRS2Q13268 280 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 JOSD1Q15040 202 aaPredicted RBP0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 KIAA0040Q15053 153 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ELOCQ15369 112 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 RBMY1FQ15415 496 aaKnown RBP0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 MMDQ15546 238 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 CST6Q15828 149 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 GRK1Q15835 563 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 KCNJ8Q15842 424 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 CCL15Q16663 113 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM183BQ1AE95 376 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 C12orf74Q32Q52 190 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 LINC00303Q3SY05 128 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 RNF212Q495C1 297 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 MORN2Q502X0 79 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 C14orf177Q52M58 125 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 MPV17L2Q567V2 206 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM128Q5BJH2 165 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 MESTQ5EB52 335 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 CENPWQ5EE01 88 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM201AQ5SY85 155 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 AKR1C8PQ5T2L2 129 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 NXNL2Q5VZ03 156 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 GLT8D1Q68CQ7 371 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 CGB2Q6NT52 195 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZFP1Q6P2D0 407 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 DNAJC24Q6P3W2 148 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 MORN3Q6PF18 240 aaPredicted RBP0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF773Q6PK81 442 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 REG3GQ6UW15 175 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 SBSNQ6UWP8 590 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGFL2Q6UWQ7 119 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 LYPD2Q6UXB3 125 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ACP7Q6ZNF0 438 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF497Q6ZNH5 498 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 IDO2Q6ZQW0 420 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 Q6ZS49 121 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 RNF165Q6ZSG1 346 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 SHISA6Q6ZSJ9 500 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 RFLNAQ6ZTI6 216 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 FA2HQ7L5A8 372 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 TCF24Q7RTU0 167 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 TCF23Q7RTU1 214 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ATP5L2Q7Z4Y8 100 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 SMIM29Q86T20 159 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 LRP11Q86VZ4 500 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ANGPTL5Q86XS5 388 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF584Q8IVC4 421 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM183AQ8IXX5 376 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ORMDL3Q8N138 153 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF567Q8N184 647 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 UMODL1-AS1Q8N2C9 162 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 OSR2Q8N2R0 312 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC35F6Q8N357 371 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC22A24Q8N4F4 322 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 C10orf126Q8N4M7 172 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM24BQ8N5W8 94 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 EIF4E3Q8N5X7 224 aaKnown RBP0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ANKRD29Q8N6D5 301 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 LINC00337Q8N6G1 96 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 C14orf178Q8N769 122 aaPredicted RBP0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF525Q8N782 197 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF615Q8N8J6 731 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM75Q8N9X5 138 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 MAPK1IP1LQ8NDC0 245 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF555Q8NEP9 628 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR11H6Q8NGC7 330 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR8J3Q8NGG0 315 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR4D11Q8NGI4 311 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR5A1Q8NGJ0 315 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR9Q1Q8NGQ5 310 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR1J4Q8NGS1 313 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR5H2Q8NGV7 314 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR5J2Q8NH18 312 aa0.42□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR4K15Q8NH41 348 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms