RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 TMED6Q8WW62 240 aa12.8□□□□□ -0.36
THUMPD3-210ENST00000515662 TMEM231Q9H6L2 316 aa12.8□□□□□ -0.36
THUMPD3-210ENST00000515662 TRGV10A0A0A0MS01 117 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 KBTBD11-OT1A0A1B0GTJ5 212 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 NKX6-3A6NJ46 265 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 RAMP3O60896 148 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 F12P00748 615 aaPredicted RBP12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 GAPDHP04406 335 aaKnown RBP12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 PVALBP20472 110 aaPredicted RBP12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 LPAR6P43657 344 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 EIF5AP63241 154 aaKnown RBP12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 CATR1Q13166 79 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 GUCA2BQ16661 112 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 TCF23Q7RTU1 214 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 CCL17Q92583 94 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 SMIM3Q9BZL3 60 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 TMEM106BQ9NUM4 274 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 CLN8Q9UBY8 286 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 PPIAL4EA0A075B759 164 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 PPIAL4DF5H284 164 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 TMPRSS2O15393 492 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 PPIAL4FP0DN26 164 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 BRWD1-AS2P59051 145 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 Q3ZCU0 254 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 ZNF66Q6ZN08 573 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 FGFRL1Q8N441 504 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 OR2C3Q8N628 320 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 TCTEX1D2Q8WW35 142 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 NKX6-2Q9C056 277 aaPredicted RBP12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 RAB9BQ9NP90 201 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 CACNG5Q9UF02 275 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 PPIAL4AQ9Y536 164 aa12.79□□□□□ -0.36
THUMPD3-210ENST00000515662 KIAA1324LA8MWY0 1029 aaPredicted RBP12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 NXPH3O95157 252 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 CLDN1O95832 211 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 MMP9P14780 707 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 TFF3Q07654 80 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 OR2B11Q5JQS5 317 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 SMG1Q96Q15 3661 aaKnown RBP12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 MED19A0JLT2 244 aaPredicted RBP12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 TMEM8BA6NDV4 472 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 C17orf98A8MV24 154 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 JTBO76095 146 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 CLDN14O95500 239 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 TMEM50AO95807 157 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 LOXP28300 417 aaPredicted RBP12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 GPR12P47775 334 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 ZNF134P52741 427 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 NHLH2Q02577 135 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 SWI5Q1ZZU3 235 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 TCTEX1D1Q8N7M0 179 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 CORO2AQ92828 525 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 MARC2Q969Z3 335 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 HSD17B10Q99714 261 aaKnown RBP12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 WFDC1Q9HC57 220 aa12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 FAM212BQ9NTI7 297 aaPredicted RBP12.78□□□□□ -0.36
THUMPD3-210ENST00000515662 FAM24AA6NFZ4 105 aa12.77□□□□□ -0.36
THUMPD3-210ENST00000515662 CHST1O43916 411 aa12.77□□□□□ -0.36
THUMPD3-210ENST00000515662 PROP1O75360 226 aa12.77□□□□□ -0.36
THUMPD3-210ENST00000515662 CAV2P51636 162 aa12.77□□□□□ -0.36
THUMPD3-210ENST00000515662 VAMP2P63027 116 aa12.77□□□□□ -0.36
THUMPD3-210ENST00000515662 EWSR1Q01844 656 aaKnown RBP eCLIP12.77□□□□□ -0.36
THUMPD3-210ENST00000515662 ZNF672Q499Z4 452 aaPredicted RBP12.77□□□□□ -0.36
THUMPD3-210ENST00000515662 SPAG16Q8N0X2 631 aa12.77□□□□□ -0.36
THUMPD3-210ENST00000515662 PUSL1Q8N0Z8 303 aaKnown RBP12.77□□□□□ -0.36
THUMPD3-210ENST00000515662 LINC00574Q9H8X3 128 aa12.77□□□□□ -0.36
THUMPD3-210ENST00000515662 LYRM2Q9NU23 88 aaPredicted RBP12.77□□□□□ -0.36
THUMPD3-210ENST00000515662 GFOD1Q9NXC2 390 aa12.77□□□□□ -0.36
THUMPD3-210ENST00000515662 IGSF23A1L1A6 192 aa12.77□□□□□ -0.37
THUMPD3-210ENST00000515662 LINC00473A8K010 186 aa12.77□□□□□ -0.37
THUMPD3-210ENST00000515662 WRBO00258 174 aa12.77□□□□□ -0.37
THUMPD3-210ENST00000515662 TNFRSF13BO14836 293 aaPredicted RBP12.77□□□□□ -0.37
THUMPD3-210ENST00000515662 FGF16O43320 207 aa12.77□□□□□ -0.37
THUMPD3-210ENST00000515662 NDUFB7P17568 137 aa12.77□□□□□ -0.37
THUMPD3-210ENST00000515662 ZNF816Q0VGE8 651 aaPredicted RBP12.77□□□□□ -0.37
THUMPD3-210ENST00000515662 UTF1Q5T230 341 aa12.77□□□□□ -0.37
THUMPD3-210ENST00000515662 UBAC2Q8NBM4 344 aa12.77□□□□□ -0.37
THUMPD3-210ENST00000515662 TMEM204Q9BSN7 226 aa12.77□□□□□ -0.37
THUMPD3-210ENST00000515662 MMP24Q9Y5R2 645 aa12.77□□□□□ -0.37
THUMPD3-210ENST00000515662 ROS1P08922 2347 aa12.77□□□□□ -0.37
THUMPD3-210ENST00000515662 ZNF729A6NN14 1252 aaPredicted RBP12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 ITGB1BP1O14713 200 aa12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 IGHV3-7P01780 117 aa12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 PAX9P55771 341 aa12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 LINC00205P59089 165 aa12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 MUC15Q8N387 334 aa12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 TSNAXQ99598 290 aaKnown RBP12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 IFI27L2Q9H2X8 130 aa12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 SLC25A10Q9UBX3 287 aaPredicted RBP12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 RELNP78509 3460 aa12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 IGHV1-69-2A0A0G2JMI3 117 aa12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 TMEM218A2RU14 115 aa12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 ATG12O94817 140 aa12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 S1PR2O95136 353 aa12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 P0C879 139 aa12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 FAM157CP0CG43 387 aa12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 EIF5AL1Q6IS14 154 aaKnown RBP12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 CBLN2Q8IUK8 224 aa12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 TMEM252Q8N6L7 170 aa12.76□□□□□ -0.37
THUMPD3-210ENST00000515662 RNF141Q8WVD5 230 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms