RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 FOXI3A8MTJ6 420 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-215ENST00000515516 SEC14L6B5MCN3 397 aa10.67□□□□□ -0.7
TCOF1-215ENST00000515516 H0YJW9 148 aa10.67□□□□□ -0.7
TCOF1-215ENST00000515516 CD40LGP29965 261 aa10.67□□□□□ -0.7
TCOF1-215ENST00000515516 PPIFP30405 207 aaKnown RBP10.67□□□□□ -0.7
TCOF1-215ENST00000515516 SERPINB10P48595 397 aa10.67□□□□□ -0.7
TCOF1-215ENST00000515516 RAB9AP51151 201 aa10.67□□□□□ -0.7
TCOF1-215ENST00000515516 CD69Q07108 199 aa10.67□□□□□ -0.7
TCOF1-215ENST00000515516 ECSCRQ19T08 205 aa10.67□□□□□ -0.7
TCOF1-215ENST00000515516 OR5AN1Q8NGI8 311 aa10.67□□□□□ -0.7
TCOF1-215ENST00000515516 OR1N2Q8NGR9 330 aa10.67□□□□□ -0.7
TCOF1-215ENST00000515516 PTX4Q96A99 478 aa10.67□□□□□ -0.7
TCOF1-215ENST00000515516 TSNAXQ99598 290 aaKnown RBP10.67□□□□□ -0.7
TCOF1-215ENST00000515516 PARP12Q9H0J9 701 aaKnown RBP10.67□□□□□ -0.7
TCOF1-215ENST00000515516 FBXL15Q9H469 300 aa10.67□□□□□ -0.7
TCOF1-215ENST00000515516 RDH8Q9NYR8 311 aa10.67□□□□□ -0.7
TCOF1-215ENST00000515516 METTL21EPA6NDL7 271 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 MRPS14O60783 128 aaKnown RBP10.66□□□□□ -0.7
TCOF1-215ENST00000515516 IGLV1-40P01703 118 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 APOA2P02652 100 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 TFAP2AP05549 437 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 OR8U8P0C7N1 319 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 TALDO1P37837 337 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 RPS16P62249 146 aaKnown RBP10.66□□□□□ -0.7
TCOF1-215ENST00000515516 CX3CL1P78423 397 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 PLAC9Q5JTB6 97 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 TCTEX1D1Q8N7M0 179 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 ZNF491Q8N8L2 437 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 OR4A4PQ8NGN8 299 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 OR5B12Q96R08 314 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 AGMATQ9BSE5 352 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 CENPOQ9BU64 300 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 KLK15Q9H2R5 256 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 Q9H521 79 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 NDUFB11Q9NX14 153 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 A3GALT2U3KPV4 340 aa10.66□□□□□ -0.7
TCOF1-215ENST00000515516 DNAH3Q8TD57 4116 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 TRDV1A0A1B0GX56 115 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 A0A1W2PN81 502 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 IFITM5A6NNB3 132 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 BET1O15155 118 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 LDLRAD4O15165 306 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 FABP7O15540 132 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 RAB3BP20337 219 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 RAB6AP20340 208 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 CHRNA7P36544 502 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 LUMP51884 338 aaPredicted RBP10.65□□□□□ -0.7
TCOF1-215ENST00000515516 GABARAPL2P60520 117 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 ZNF616Q08AN1 781 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 CBX3Q13185 183 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 SSX1Q16384 188 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 VAX1Q5SQQ9 334 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 DRAXINQ8NBI3 349 aaPredicted RBP10.65□□□□□ -0.7
TCOF1-215ENST00000515516 MINDY2Q8NBR6 621 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.65□□□□□ -0.7
TCOF1-215ENST00000515516 OR10R2Q8NGX6 335 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 OR10J5Q8NHC4 309 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 MYOZ3Q8TDC0 251 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 FLYWCH2Q96CP2 140 aaKnown RBP10.65□□□□□ -0.7
TCOF1-215ENST00000515516 CLCC1Q96S66 551 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 GNB4Q9HAV0 340 aa10.65□□□□□ -0.7
TCOF1-215ENST00000515516 METTL1Q9UBP6 276 aaKnown RBP10.65□□□□□ -0.7
TCOF1-215ENST00000515516 FOXA2Q9Y261 457 aaPredicted RBP10.65□□□□□ -0.7
TCOF1-215ENST00000515516 RBM7Q9Y580 266 aaKnown RBP10.65□□□□□ -0.7
TCOF1-215ENST00000515516 A0A075B6Q4 140 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 M0R1X1 148 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 GNB3P16520 340 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 GALP22466 123 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 ECI1P42126 302 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 OR10A3P58181 314 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 RUNX1Q01196 453 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 FHL3Q13643 280 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 ARFRP1Q13795 201 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 ARL6IP1Q15041 203 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 PSG5Q15238 335 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 ZNF260Q3ZCT1 412 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 PYHIN1Q6K0P9 492 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 ZNF562Q6V9R5 426 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 PPP1R27Q86WC6 154 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 PDPNQ86YL7 162 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 GINS4Q9BRT9 223 aa10.64□□□□□ -0.71
TCOF1-215ENST00000515516 IGKV1-6A0A0C4DH72 117 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 I3L521 148 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 FCN1O00602 326 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 SPDEFO95238 335 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 FCGR3AP08637 254 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 OR8U9P0C7N5 309 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 GSTT2P0CG29 244 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 GSTT2BP0CG30 244 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 PSMB9P28065 219 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 INSL3P51460 131 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 CRIP2P52943 208 aaPredicted RBP10.63□□□□□ -0.71
TCOF1-215ENST00000515516 PLA2G7Q13093 441 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 KIAA0141Q14154 515 aaPredicted RBP10.63□□□□□ -0.71
TCOF1-215ENST00000515516 MOGAT2Q3SYC2 334 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 ACTBL2Q562R1 376 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 C22orf42Q6IC83 251 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 CD200R1LQ6Q8B3 271 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 UNQ5815/PRO19632Q6UWF5 114 aa10.63□□□□□ -0.71
TCOF1-215ENST00000515516 ZNF383Q8NA42 475 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms