RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	SPDEF	O95238	335 aa		11.98	□□□□□ -0.49
LMNA-223	ENST00000515459	SNRPB	P14678	240 aa	Known RBP	11.98	□□□□□ -0.49
LMNA-223	ENST00000515459	CPE	P16870	476 aa		11.98	□□□□□ -0.49
LMNA-223	ENST00000515459	MYL12A	P19105	171 aa		11.98	□□□□□ -0.49
LMNA-223	ENST00000515459	TATDN3	Q17R31	274 aa		11.98	□□□□□ -0.49
LMNA-223	ENST00000515459	SVOP	Q8N4V2	548 aa		11.98	□□□□□ -0.49
LMNA-223	ENST00000515459	OR5T1	Q8NG75	326 aa		11.98	□□□□□ -0.49
LMNA-223	ENST00000515459	PGLYRP3	Q96LB9	341 aa		11.98	□□□□□ -0.49
LMNA-223	ENST00000515459	FAM110A	Q9BQ89	295 aa		11.98	□□□□□ -0.49
LMNA-223	ENST00000515459	AGMAT	Q9BSE5	352 aa		11.98	□□□□□ -0.49
LMNA-223	ENST00000515459	FAAP24	Q9BTP7	215 aa		11.98	□□□□□ -0.49
LMNA-223	ENST00000515459	SIGLEC8	Q9NYZ4	499 aa		11.98	□□□□□ -0.49
LMNA-223	ENST00000515459	GHRL	Q9UBU3	117 aa		11.98	□□□□□ -0.49
LMNA-223	ENST00000515459	IRGM	A1A4Y4	181 aa		11.97	□□□□□ -0.49
LMNA-223	ENST00000515459		H3BNX3	289 aa		11.97	□□□□□ -0.49
LMNA-223	ENST00000515459	ITGB1BP1	O14713	200 aa		11.97	□□□□□ -0.49
LMNA-223	ENST00000515459	WBP4	O75554	376 aa	Known RBP	11.97	□□□□□ -0.49
LMNA-223	ENST00000515459	RPS16	P62249	146 aa	Known RBP	11.97	□□□□□ -0.49
LMNA-223	ENST00000515459	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.97	□□□□□ -0.49
LMNA-223	ENST00000515459	NKAIN3	Q8N8D7	197 aa		11.97	□□□□□ -0.49
LMNA-223	ENST00000515459	ZFP41	Q8N8Y5	198 aa		11.97	□□□□□ -0.49
LMNA-223	ENST00000515459	SLC29A1	Q99808	456 aa		11.97	□□□□□ -0.49
LMNA-223	ENST00000515459	UQCC2	Q9BRT2	126 aa		11.97	□□□□□ -0.49
LMNA-223	ENST00000515459	C9orf16	Q9BUW7	83 aa		11.97	□□□□□ -0.49
LMNA-223	ENST00000515459	KRTAP17-1	Q9BYP8	105 aa		11.97	□□□□□ -0.49
LMNA-223	ENST00000515459	PEF1	Q9UBV8	284 aa	Known RBP	11.97	□□□□□ -0.49
LMNA-223	ENST00000515459	DIMT1	Q9UNQ2	313 aa	Known RBP	11.97	□□□□□ -0.49
LMNA-223	ENST00000515459	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.97	□□□□□ -0.49
LMNA-223	ENST00000515459	IZUMO1R	A6ND01	250 aa		11.96	□□□□□ -0.49
LMNA-223	ENST00000515459	CNIH1	O95406	144 aa		11.96	□□□□□ -0.49
LMNA-223	ENST00000515459	IGKV1-16	P04430	117 aa		11.96	□□□□□ -0.49
LMNA-223	ENST00000515459	CSN3	P07498	182 aa		11.96	□□□□□ -0.49
LMNA-223	ENST00000515459	AADAC	P22760	399 aa		11.96	□□□□□ -0.49
LMNA-223	ENST00000515459	ZFP1	Q6P2D0	407 aa		11.96	□□□□□ -0.49
LMNA-223	ENST00000515459	C6orf201	Q7Z4U5	140 aa		11.96	□□□□□ -0.49
LMNA-223	ENST00000515459	DRAXIN	Q8NBI3	349 aa	Predicted RBP	11.96	□□□□□ -0.49
LMNA-223	ENST00000515459	SETD6	Q8TBK2	473 aa		11.96	□□□□□ -0.49
LMNA-223	ENST00000515459	EDARADD	Q8WWZ3	215 aa		11.96	□□□□□ -0.49
LMNA-223	ENST00000515459	DERL3	Q96Q80	235 aa		11.96	□□□□□ -0.49
LMNA-223	ENST00000515459	PARP12	Q9H0J9	701 aa	Known RBP	11.96	□□□□□ -0.49
LMNA-223	ENST00000515459	PLEKHA3	Q9HB20	300 aa		11.96	□□□□□ -0.49
LMNA-223	ENST00000515459	CHMP1A	Q9HD42	196 aa	Predicted RBP	11.96	□□□□□ -0.49
LMNA-223	ENST00000515459	CLEC2D	Q9UHP7	191 aa		11.96	□□□□□ -0.49
LMNA-223	ENST00000515459	SLC25A17	O43808	307 aa		11.95	□□□□□ -0.5
LMNA-223	ENST00000515459	BRI3	O95415	125 aa		11.95	□□□□□ -0.5
LMNA-223	ENST00000515459	NAPSA	O96009	420 aa		11.95	□□□□□ -0.5
LMNA-223	ENST00000515459	ZBTB25	P24278	435 aa		11.95	□□□□□ -0.5
LMNA-223	ENST00000515459	MED21	Q13503	144 aa		11.95	□□□□□ -0.5
LMNA-223	ENST00000515459	RPEL1	Q2QD12	228 aa		11.95	□□□□□ -0.5
LMNA-223	ENST00000515459	ZNF343	Q6P1L6	599 aa		11.95	□□□□□ -0.5
LMNA-223	ENST00000515459	ZNF880	Q6PDB4	577 aa		11.95	□□□□□ -0.5
LMNA-223	ENST00000515459	MOB1B	Q7L9L4	216 aa		11.95	□□□□□ -0.5
LMNA-223	ENST00000515459	OR2K2	Q8NGT1	345 aa		11.95	□□□□□ -0.5
LMNA-223	ENST00000515459	TMEM68	Q96MH6	324 aa		11.95	□□□□□ -0.5
LMNA-223	ENST00000515459	C11orf54	Q9H0W9	315 aa	Predicted RBP	11.95	□□□□□ -0.5
LMNA-223	ENST00000515459	ADAM30	Q9UKF2	790 aa		11.95	□□□□□ -0.5
LMNA-223	ENST00000515459	PROP1	O75360	226 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	TPPP	O94811	219 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	OR2A4	O95047	310 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	TRBV12-3	P01733	135 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	APOA2	P02652	100 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	UBB	P0CG47	229 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	CEACAM6	P40199	344 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	LGALS7	P47929	136 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	CD81	P60033	236 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	RNLS	Q5VYX0	342 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	PDPN	Q86YL7	162 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	ZNF383	Q8NA42	475 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	BVES	Q8NE79	360 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	TMEM80	Q96HE8	168 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	USMG5	Q96IX5	58 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	PEMT	Q9UBM1	199 aa		11.94	□□□□□ -0.5
LMNA-223	ENST00000515459	PNMA8C	A0A1B0GUJ8	204 aa		11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	DYNC1I1	O14576	645 aa		11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	MECP2	P51608	486 aa	Known RBP	11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	TAS2R43	P59537	309 aa		11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	RPS27A	P62979	156 aa	Known RBP	11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	SSBP2	P81877	361 aa	Predicted RBP	11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	DEFA5	Q01523	94 aa		11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	OR10K2	Q6IF99	312 aa		11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	LAX1	Q8IWV1	398 aa		11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	ZNF485	Q8NCK3	441 aa		11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	ZNF555	Q8NEP9	628 aa		11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	THRSP	Q92748	146 aa		11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	SNAPC3	Q92966	411 aa		11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	NEURL2	Q9BR09	285 aa		11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	TMEM59	Q9BXS4	323 aa		11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	SLC2A8	Q9NY64	477 aa		11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	OR1A1	Q9P1Q5	309 aa		11.93	□□□□□ -0.5
LMNA-223	ENST00000515459	ZNF221	Q9UK13	617 aa		11.93	□□□□□ -0.5
LMNA-223	ENST00000515459		A0A0B4J203	849 aa		11.92	□□□□□ -0.5
LMNA-223	ENST00000515459	AIRE	O43918	545 aa		11.92	□□□□□ -0.5
LMNA-223	ENST00000515459	MAPK3	P27361	379 aa	Predicted RBP	11.92	□□□□□ -0.5
LMNA-223	ENST00000515459	HTR2C	P28335	458 aa		11.92	□□□□□ -0.5
LMNA-223	ENST00000515459	LINC00205	P59089	165 aa		11.92	□□□□□ -0.5
LMNA-223	ENST00000515459	PJVK	Q0ZLH3	352 aa		11.92	□□□□□ -0.5
LMNA-223	ENST00000515459	DYRK1A	Q13627	763 aa		11.92	□□□□□ -0.5
LMNA-223	ENST00000515459	LINC00476	Q8WZB0	136 aa		11.92	□□□□□ -0.5
LMNA-223	ENST00000515459	PTX4	Q96A99	478 aa		11.92	□□□□□ -0.5

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