RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 BET1O15155 118 aa10.08□□□□□ -0.8
CLCN3-210ENST00000515420 IGF1P05019 195 aa10.08□□□□□ -0.8
CLCN3-210ENST00000515420 GSTT2P0CG29 244 aa10.08□□□□□ -0.8
CLCN3-210ENST00000515420 GSTT2BP0CG30 244 aa10.08□□□□□ -0.8
CLCN3-210ENST00000515420 GNG2P59768 71 aa10.08□□□□□ -0.8
CLCN3-210ENST00000515420 IGSF11Q5DX21 431 aa10.08□□□□□ -0.8
CLCN3-210ENST00000515420 FAM131AQ6UXB0 335 aa10.08□□□□□ -0.8
CLCN3-210ENST00000515420 R3HDM4Q96D70 268 aa10.08□□□□□ -0.8
CLCN3-210ENST00000515420 NOL4LQ96MY1 436 aaPredicted RBP10.08□□□□□ -0.8
CLCN3-210ENST00000515420 GINS4Q9BRT9 223 aa10.08□□□□□ -0.8
CLCN3-210ENST00000515420 KIAA1456Q9P272 454 aa10.08□□□□□ -0.8
CLCN3-210ENST00000515420 ZNF230Q9UIE0 474 aaPredicted RBP10.08□□□□□ -0.8
CLCN3-210ENST00000515420 WASHC3Q9Y3C0 194 aa10.08□□□□□ -0.8
CLCN3-210ENST00000515420 CMYA5Q8N3K9 4069 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 TMEM235A6NFC5 223 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 PROP1O75360 226 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 TFAP2AP05549 437 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 OR5H8P0DN80 308 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 TAGLNQ01995 201 aaKnown RBP10.07□□□□□ -0.8
CLCN3-210ENST00000515420 C5orf64Q2M2E5 130 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 TEX38Q6PEX7 206 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 C10orf99Q6UWK7 81 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 PDPNQ86YL7 162 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 H1FOOQ8IZA3 346 aaPredicted RBP10.07□□□□□ -0.8
CLCN3-210ENST00000515420 OR13F1Q8NGS4 319 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 OR5H6Q8NGV6 325 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 MAFIPQ8WZ33 124 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 KCTD12Q96CX2 325 aaKnown RBP10.07□□□□□ -0.8
CLCN3-210ENST00000515420 FUNDC2Q9BWH2 189 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 OR2D2Q9H210 308 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 DIABLOQ9NR28 239 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 ZFP57Q9NU63 452 aa10.07□□□□□ -0.8
CLCN3-210ENST00000515420 ZNF107Q9UII5 783 aaPredicted RBP10.07□□□□□ -0.8
CLCN3-210ENST00000515420 ELF5Q9UKW6 265 aaPredicted RBP10.07□□□□□ -0.8
CLCN3-210ENST00000515420 NOTCH1P46531 2555 aa10.06□□□□□ -0.8
CLCN3-210ENST00000515420 LINC01548A6NM66 108 aa10.06□□□□□ -0.8
CLCN3-210ENST00000515420 SPDEFO95238 335 aa10.06□□□□□ -0.8
CLCN3-210ENST00000515420 APOA2P02652 100 aa10.06□□□□□ -0.8
CLCN3-210ENST00000515420 ELANEP08246 267 aa10.06□□□□□ -0.8
CLCN3-210ENST00000515420 RPS19P39019 145 aaKnown RBP10.06□□□□□ -0.8
CLCN3-210ENST00000515420 HIST2H2BDQ6DRA6 164 aa10.06□□□□□ -0.8
CLCN3-210ENST00000515420 CNIH2Q6PI25 160 aa10.06□□□□□ -0.8
CLCN3-210ENST00000515420 ZNF329Q86UD4 541 aa10.06□□□□□ -0.8
CLCN3-210ENST00000515420 RNF152Q8N8N0 203 aa10.06□□□□□ -0.8
CLCN3-210ENST00000515420 NUDCD2Q8WVJ2 157 aa10.06□□□□□ -0.8
CLCN3-210ENST00000515420 SLC25A46Q96AG3 418 aa10.06□□□□□ -0.8
CLCN3-210ENST00000515420 HSPB9Q9BQS6 159 aa10.06□□□□□ -0.8
CLCN3-210ENST00000515420 RNF150Q9ULK6 438 aa10.06□□□□□ -0.8
CLCN3-210ENST00000515420 IGKV1D-8A0A087WSZ0 117 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 H7C2Y5 167 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 RRHO14718 337 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 SSX5O60225 188 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 SLC22A5O76082 557 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 OR8U9P0C7N5 309 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 SMIM18P0DKX4 95 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 PF4V1P10720 104 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 VDAC1P21796 283 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 CNTFRP26992 372 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 TGFBR1P36897 503 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 CRIP2P52943 208 aaPredicted RBP10.05□□□□□ -0.8
CLCN3-210ENST00000515420 RPL23AP62750 156 aaKnown RBP10.05□□□□□ -0.8
CLCN3-210ENST00000515420 CFHR3Q02985 330 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 FOXE3Q13461 319 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 KHDC1LQ5JSQ8 128 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 UBE2NLQ5JXB2 153 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 LIN54Q6MZP7 749 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 GLDNQ6ZMI3 551 aaPredicted RBP10.05□□□□□ -0.8
CLCN3-210ENST00000515420 ZNF383Q8NA42 475 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 OR8U1Q8NH10 309 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 ADTRPQ96IZ2 230 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 RITA1Q96K30 269 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 TSNAXQ99598 290 aaKnown RBP10.05□□□□□ -0.8
CLCN3-210ENST00000515420 ST6GALNAC5Q9BVH7 336 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 OR51J1Q9H342 316 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 SDHAF2Q9NX18 166 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 ANXA10Q9UJ72 324 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 LINC00527Q9UJ94 153 aa10.05□□□□□ -0.8
CLCN3-210ENST00000515420 RBM7Q9Y580 266 aaKnown RBP10.05□□□□□ -0.8
CLCN3-210ENST00000515420 TRAV18A0A075B6X5 111 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 IGHV7-81A0A0B4J1V7 117 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 A0A1W2PRX2 142 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 M0R1X1 148 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 XRCC3O43542 346 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 IGHG4P01861 327 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 PF4P02776 101 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 RRASP10301 218 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 CBX5P45973 191 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 THBS3P49746 956 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 LSM3P62310 102 aaKnown RBP10.04□□□□□ -0.8
CLCN3-210ENST00000515420 CXorf66Q5JRM2 361 aaPredicted RBP10.04□□□□□ -0.8
CLCN3-210ENST00000515420 SAMD5Q5TGI4 173 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 ZNF660Q6AZW8 331 aaPredicted RBP10.04□□□□□ -0.8
CLCN3-210ENST00000515420 WFDC9Q8NEX5 89 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 S100A16Q96FQ6 103 aaKnown RBP10.04□□□□□ -0.8
CLCN3-210ENST00000515420 CMTM3Q96MX0 182 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 AUNIPQ9H7T9 357 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 OR2W1Q9Y3N9 320 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 NOTCH3Q9UM47 2321 aa10.04□□□□□ -0.8
CLCN3-210ENST00000515420 ATP6V0E1O15342 81 aa10.03□□□□□ -0.8
CLCN3-210ENST00000515420 GABARAPO95166 117 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms