RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 TLE4Q04727 773 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 ZNF816Q0VGE8 651 aaPredicted RBP7.51□□□□□ -1.21
CPNE4-213ENST00000515418 NCR3LG1Q68D85 454 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 HEPN1Q6WQI6 88 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 ODF3L1Q8IXM7 274 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 LYG1Q8N1E2 194 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 C11orf42Q8N5U0 333 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 ZBTB8BQ8NAP8 495 aaPredicted RBP7.51□□□□□ -1.21
CPNE4-213ENST00000515418 ZNF439Q8NDP4 499 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 OR8B3Q8NGG8 313 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 TCTEX1D2Q8WW35 142 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 RBPMSQ93062 196 aaKnown RBP7.51□□□□□ -1.21
CPNE4-213ENST00000515418 NEIL1Q96FI4 390 aaPredicted RBP7.51□□□□□ -1.21
CPNE4-213ENST00000515418 OR8B2Q96RD0 313 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 ABHD14AQ9BUJ0 271 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 OR5AC2Q9NZP5 309 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 MIOXQ9UGB7 285 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 M0R1X1 148 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 NXPH3O95157 252 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 EPHA1P21709 976 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 LPAR6P43657 344 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 FGL1Q08830 312 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 TMEM155Q4W5P6 130 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 Q6ZRM9 215 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 SPAG16Q8N0X2 631 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 ZBTB34Q8NCN2 500 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 THAP6Q8TBB0 222 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 IGFBPL1Q8WX77 278 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 ASB13Q8WXK3 278 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 CCL19Q99731 98 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 TMED3Q9Y3Q3 217 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 GCN1Q92616 2671 aaKnown RBP7.5□□□□□ -1.21
CPNE4-213ENST00000515418 SAA2-SAA4A0A096LPE2 208 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 PPIAL4CA0A0B4J2A2 164 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 HMSDA8MTL9 139 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 C22orf46C9J442 243 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 L7N2F9 121 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 IGKV1-5P01602 117 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 MBPP02686 304 aaPredicted RBP7.5□□□□□ -1.21
CPNE4-213ENST00000515418 SAA2P0DJI9 122 aaPredicted RBP7.5□□□□□ -1.21
CPNE4-213ENST00000515418 PPIAL4GP0DN37 164 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 COX6B1P14854 86 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 DUTP33316 252 aaKnown RBP7.5□□□□□ -1.21
CPNE4-213ENST00000515418 SRPXP78539 464 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 CXorf66Q5JRM2 361 aaPredicted RBP7.5□□□□□ -1.21
CPNE4-213ENST00000515418 ZNF295-AS1Q8N0V1 137 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 OR1S1Q8NH92 325 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 GPR146Q96CH1 333 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 RRNAD1Q96FB5 475 aaKnown RBP7.5□□□□□ -1.21
CPNE4-213ENST00000515418 ZNF251Q9BRH9 671 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 MFFQ9GZY8 342 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 PATZ1Q9HBE1 687 aaKnown RBP7.5□□□□□ -1.21
CPNE4-213ENST00000515418 RAB9BQ9NP90 201 aa7.5□□□□□ -1.21
CPNE4-213ENST00000515418 LIN7CQ9NUP9 197 aaKnown RBP7.5□□□□□ -1.21
CPNE4-213ENST00000515418 LSM5Q9Y4Y9 91 aaKnown RBP7.5□□□□□ -1.21
CPNE4-213ENST00000515418 APCP25054 2843 aa7.49□□□□□ -1.21
CPNE4-213ENST00000515418 KRASP01116 189 aa7.49□□□□□ -1.21
CPNE4-213ENST00000515418 IGHV1-8P0DP01 117 aa7.49□□□□□ -1.21
CPNE4-213ENST00000515418 SLC25A4P12235 298 aa7.49□□□□□ -1.21
CPNE4-213ENST00000515418 VDAC1P21796 283 aa7.49□□□□□ -1.21
CPNE4-213ENST00000515418 ZFP36P26651 326 aaKnown RBP7.49□□□□□ -1.21
CPNE4-213ENST00000515418 G6PCP35575 357 aa7.49□□□□□ -1.21
CPNE4-213ENST00000515418 GNB2P62879 340 aa7.49□□□□□ -1.21
CPNE4-213ENST00000515418 NMSQ5H8A3 153 aa7.49□□□□□ -1.21
CPNE4-213ENST00000515418 SLC25A48Q6ZT89 311 aaKnown RBP7.49□□□□□ -1.21
CPNE4-213ENST00000515418 TMUB2Q71RG4 321 aa7.49□□□□□ -1.21
CPNE4-213ENST00000515418 DCUN1D4Q92564 292 aa7.49□□□□□ -1.21
CPNE4-213ENST00000515418 MAGT1Q9H0U3 335 aa7.49□□□□□ -1.21
CPNE4-213ENST00000515418 LPAR3Q9UBY5 353 aa7.49□□□□□ -1.21
CPNE4-213ENST00000515418 TNFSF18Q9UNG2 199 aa7.49□□□□□ -1.21
CPNE4-213ENST00000515418 TNCP24821 2201 aa7.49□□□□□ -1.21
CPNE4-213ENST00000515418 TRBV23-1A0A0A0MS06 115 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 RNF212BA8MTL3 300 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 RAB29O14966 203 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 FCGR3BO75015 233 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 S1PR2O95136 353 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 PLA2G2AP14555 144 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 RAB7AP51149 207 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 ARF6P62330 175 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 CATR1Q13166 79 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 DIAPH2-AS1Q14236 149 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 TMEM65Q6PI78 240 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 HSD17B10Q99714 261 aaKnown RBP7.48□□□□□ -1.21
CPNE4-213ENST00000515418 BPESC1Q9GZL8 116 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 ARL6Q9H0F7 186 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 HEXA-AS1Q9H8Q6 139 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 ONECUT1Q9UBC0 465 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 ABCA2Q9BZC7 2435 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 RNF222A6NCQ9 220 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 MSGN1A6NI15 193 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 K7EPK0 472 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 ITGB1BP1O14713 200 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 REG1BP48304 166 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 AKR1C2P52895 323 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 OPCMLQ14982 345 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 PRSS54Q6PEW0 395 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 CLEC9AQ6UXN8 241 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 ZNF66Q6ZN08 573 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 VKORC1L1Q8N0U8 176 aa7.48□□□□□ -1.21
CPNE4-213ENST00000515418 ABHD12Q8N2K0 398 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms