RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 C5orf64Q2M2E5 130 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 TPRA1Q86W33 373 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 ZNF383Q8NA42 475 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 KLHL30-AS1Q8NEE0 82 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 TSPAN14Q8NG11 270 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 OR8H1Q8NGG4 311 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 OR4A4PQ8NGN8 299 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 NUDCD2Q8WVJ2 157 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 PHF21AQ96BD5 680 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 C5orf30Q96GV9 206 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 PARP11Q9NR21 331 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 ZNF221Q9UK13 617 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 MGAT4AQ9UM21 535 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 A3GALT2U3KPV4 340 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 PRKDCP78527 4128 aaKnown RBP9.01□□□□□ -0.97
VCAN-212ENST00000515397 IGHV7-81A0A0B4J1V7 117 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 M0R1X1 148 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 IGKV1-16P04430 117 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 PTHLHP12272 177 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 RANBP1P43487 201 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 RPS16P62249 146 aaKnown RBP9.01□□□□□ -0.97
VCAN-212ENST00000515397 NDPQ00604 133 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 DEFB136Q30KP8 78 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 LIN54Q6MZP7 749 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 TEX38Q6PEX7 206 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 ETV3LQ6ZN32 361 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 OR10J5Q8NHC4 309 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 CASTOR1Q8WTX7 329 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 EDARADDQ8WWZ3 215 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 PTX4Q96A99 478 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 KLK15Q9H2R5 256 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 GAB2Q9UQC2 676 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 FBXO7Q9Y3I1 522 aa9.01□□□□□ -0.97
VCAN-212ENST00000515397 TRAV18A0A075B6X5 111 aa9□□□□□ -0.97
VCAN-212ENST00000515397 A0A087WXM4 84 aa9□□□□□ -0.97
VCAN-212ENST00000515397 TRBV6-7A0A0A0MS04 114 aa9□□□□□ -0.97
VCAN-212ENST00000515397 ITGB1BP1O14713 200 aa9□□□□□ -0.97
VCAN-212ENST00000515397 RRHO14718 337 aa9□□□□□ -0.97
VCAN-212ENST00000515397 ATP6V0E1O15342 81 aa9□□□□□ -0.97
VCAN-212ENST00000515397 SSX5O60225 188 aa9□□□□□ -0.97
VCAN-212ENST00000515397 VDAC1P21796 283 aa9□□□□□ -0.97
VCAN-212ENST00000515397 RAB25P57735 213 aa9□□□□□ -0.97
VCAN-212ENST00000515397 CX3CL1P78423 397 aa9□□□□□ -0.97
VCAN-212ENST00000515397 PLGLAQ15195 96 aa9□□□□□ -0.97
VCAN-212ENST00000515397 ZNF260Q3ZCT1 412 aa9□□□□□ -0.97
VCAN-212ENST00000515397 MRPL41Q8IXM3 137 aaKnown RBP9□□□□□ -0.97
VCAN-212ENST00000515397 WFDC9Q8NEX5 89 aa9□□□□□ -0.97
VCAN-212ENST00000515397 NPBQ8NG41 125 aa9□□□□□ -0.97
VCAN-212ENST00000515397 OR5AN1Q8NGI8 311 aa9□□□□□ -0.97
VCAN-212ENST00000515397 SLC25A38Q96DW6 304 aa9□□□□□ -0.97
VCAN-212ENST00000515397 YIPF6Q96EC8 236 aa9□□□□□ -0.97
VCAN-212ENST00000515397 OR5B12Q96R08 314 aa9□□□□□ -0.97
VCAN-212ENST00000515397 GINS4Q9BRT9 223 aa9□□□□□ -0.97
VCAN-212ENST00000515397 FAM103A1Q9BTL3 118 aaKnown RBP9□□□□□ -0.97
VCAN-212ENST00000515397 CABLES2Q9BTV7 478 aa9□□□□□ -0.97
VCAN-212ENST00000515397 OR2D2Q9H210 308 aa9□□□□□ -0.97
VCAN-212ENST00000515397 OR51J1Q9H342 316 aa9□□□□□ -0.97
VCAN-212ENST00000515397 TPSG1Q9NRR2 321 aa9□□□□□ -0.97
VCAN-212ENST00000515397 SDHAF2Q9NX18 166 aa9□□□□□ -0.97
VCAN-212ENST00000515397 RHBDL2Q9NX52 303 aa9□□□□□ -0.97
VCAN-212ENST00000515397 KIAA1456Q9P272 454 aa9□□□□□ -0.97
VCAN-212ENST00000515397 WASHC3Q9Y3C0 194 aa9□□□□□ -0.97
VCAN-212ENST00000515397 RBM7Q9Y580 266 aaKnown RBP9□□□□□ -0.97
VCAN-212ENST00000515397 RRP9O43818 475 aaKnown RBP8.99□□□□□ -0.97
VCAN-212ENST00000515397 AIREO43918 545 aa8.99□□□□□ -0.97
VCAN-212ENST00000515397 TFAP2AP05549 437 aa8.99□□□□□ -0.97
VCAN-212ENST00000515397 NFYAP23511 347 aaPredicted RBP8.99□□□□□ -0.97
VCAN-212ENST00000515397 HOXD3P31249 432 aaPredicted RBP8.99□□□□□ -0.97
VCAN-212ENST00000515397 RPS19P39019 145 aaKnown RBP8.99□□□□□ -0.97
VCAN-212ENST00000515397 THBS3P49746 956 aa8.99□□□□□ -0.97
VCAN-212ENST00000515397 CFHR3Q02985 330 aa8.99□□□□□ -0.97
VCAN-212ENST00000515397 KIR2DS1Q14954 304 aa8.99□□□□□ -0.97
VCAN-212ENST00000515397 PSG5Q15238 335 aa8.99□□□□□ -0.97
VCAN-212ENST00000515397 ECSCRQ19T08 205 aa8.99□□□□□ -0.97
VCAN-212ENST00000515397 CXorf66Q5JRM2 361 aaPredicted RBP8.99□□□□□ -0.97
VCAN-212ENST00000515397 HACD4Q5VWC8 232 aa8.99□□□□□ -0.97
VCAN-212ENST00000515397 FOXB2Q5VYV0 432 aa8.99□□□□□ -0.97
VCAN-212ENST00000515397 FAM71F2Q6NXP2 309 aa8.99□□□□□ -0.97
VCAN-212ENST00000515397 ZNF695Q8IW36 515 aa8.99□□□□□ -0.97
VCAN-212ENST00000515397 GVQW1Q8N7I0 195 aa8.99□□□□□ -0.97
VCAN-212ENST00000515397 ABHD5Q8WTS1 349 aa8.99□□□□□ -0.97
VCAN-212ENST00000515397 RAX2Q96IS3 184 aa8.99□□□□□ -0.97
VCAN-212ENST00000515397 OR5H14A6NHG9 310 aa8.98□□□□□ -0.97
VCAN-212ENST00000515397 SLC25A17O43808 307 aa8.98□□□□□ -0.97
VCAN-212ENST00000515397 NDUFA3O95167 84 aa8.98□□□□□ -0.97
VCAN-212ENST00000515397 TNFAIP8O95379 198 aa8.98□□□□□ -0.97
VCAN-212ENST00000515397 IGHG4P01861 327 aa8.98□□□□□ -0.97
VCAN-212ENST00000515397 HLA-DRB1P01911 266 aa8.98□□□□□ -0.97
VCAN-212ENST00000515397 IGF1P05019 195 aa8.98□□□□□ -0.97
VCAN-212ENST00000515397 EGR2P11161 476 aaPredicted RBP8.98□□□□□ -0.97
VCAN-212ENST00000515397 MC5RP33032 325 aa8.98□□□□□ -0.97
VCAN-212ENST00000515397 SERPINB10P48595 397 aa8.98□□□□□ -0.97
VCAN-212ENST00000515397 GNG2P59768 71 aa8.98□□□□□ -0.97
VCAN-212ENST00000515397 PJVKQ0ZLH3 352 aa8.98□□□□□ -0.97
VCAN-212ENST00000515397 FOXE3Q13461 319 aa8.98□□□□□ -0.97
VCAN-212ENST00000515397 H1FOOQ8IZA3 346 aaPredicted RBP8.98□□□□□ -0.97
VCAN-212ENST00000515397 LINC00482Q8N8I6 264 aa8.98□□□□□ -0.97
VCAN-212ENST00000515397 BVESQ8NE79 360 aa8.98□□□□□ -0.97
VCAN-212ENST00000515397 SLC35D1Q9NTN3 355 aa8.98□□□□□ -0.97
VCAN-212ENST00000515397 ZFP57Q9NU63 452 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms