RNA–Protein interactions for RNA: ENST00000514649.5

TNFRSF8-205, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,412 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-205ENST00000514649 LHX4Q969G2 390 aa15.37■□□□□ 0.05
TNFRSF8-205ENST00000514649 OR5B12Q96R08 314 aa15.37■□□□□ 0.05
TNFRSF8-205ENST00000514649 FRYLO94915 3013 aa15.37■□□□□ 0.05
TNFRSF8-205ENST00000514649 IFNA1P01562 189 aa15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 OR10J1P30954 320 aa15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 ERVS71-1P61550 626 aa15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 CYP2G1PQ6ZSU1 146 aa15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 GBGT1Q8N5D6 347 aa15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 RPP25LQ8N5L8 163 aaKnown RBP15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 OR10V1Q8NGI7 309 aa15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 SLC39A9Q9NUM3 307 aa15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 POLR3KQ9Y2Y1 108 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 HMGB3O15347 200 aaKnown RBP15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 NGFP01138 241 aa15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 IGKV1D-33P01593 117 aa15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 IGKV1-33P01594 117 aa15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 APOBEC3AP31941 199 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 IDH3GP51553 393 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 TRA2AQ13595 282 aaKnown RBP eCLIP15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 IL11RAQ14626 422 aa15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 CLEC12BQ2HXU8 276 aa15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 MCEMP1Q8IX19 187 aa15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 PINX1Q96BK5 328 aaKnown RBP15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 MRPS17Q9Y2R5 130 aaKnown RBP15.36■□□□□ 0.05
TNFRSF8-205ENST00000514649 SCGB1D1O95968 90 aa15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 GALR1P47211 349 aa15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 MEF2BQ02080 365 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 MYPOPQ86VE0 399 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 SAP25Q8TEE9 199 aa15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 TAF15Q92804 592 aaKnown RBP eCLIP15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 RPUSD4Q96CM3 377 aaKnown RBP15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 WFIKKN1Q96NZ8 548 aa15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 TECTAO75443 2155 aa15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 DIDO1Q9BTC0 2240 aaKnown RBP15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 TRBV6-6A0A0A6YYG2 114 aa15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 UBE2L5PA0A1B0GUS4 154 aa15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 LRRC3CA6NJW4 275 aa15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 CCL4P13236 92 aa15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 BSXQ3C1V8 233 aa15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 ZNF585BQ52M93 769 aa15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 OR5A2Q8NGI9 324 aa15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 THOC3Q96J01 351 aaKnown RBP15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 NAGKQ9UJ70 344 aa15.35■□□□□ 0.05
TNFRSF8-205ENST00000514649 PIGBOS1A0A0B4J2F0 54 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 ZNF503-AS2A6NEH8 195 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 MRPL33O75394 65 aaKnown RBP15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 PDGFBP01127 241 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 PPBPP02775 128 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 TYMSP04818 313 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 FOXG1P55316 489 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 RPL23P62829 140 aaKnown RBP15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 CISD2Q8N5K1 135 aaKnown RBP15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 OR2Y1Q8NGV0 311 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 TTC28Q96AY4 2481 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 H7BYZ3 331 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 KBTBD11O94819 623 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 RPL29P47914 159 aaKnown RBP15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 RTP5Q14D33 572 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 TESK1Q15569 626 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 OR8G2PQ6IF36 304 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 UBALD2Q8IYN6 164 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 SPEM1Q8N4L4 309 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 UBALD1Q8TB05 177 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 PCGF1Q9BSM1 259 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 DLL3Q9NYJ7 618 aa15.34■□□□□ 0.05
TNFRSF8-205ENST00000514649 VPS13AQ96RL7 3174 aa15.33■□□□□ 0.05
TNFRSF8-205ENST00000514649 LILRA1O75019 489 aa15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 HRASP01112 189 aa15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 TMEM37Q8WXS4 190 aa15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 CORO2AQ92828 525 aa15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 APOBEC3DQ96AK3 386 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 ELOVL1Q9BW60 279 aa15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 DEPPQ9NTK1 212 aa15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 TNRC6AQ8NDV7 1962 aaKnown RBP15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 SLC38A11Q08AI6 406 aa15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 IGFBP7Q16270 282 aa15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 FAM58AQ8N1B3 248 aa15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 CLUHP3Q96NS8 147 aa15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 IMMP2LQ96T52 175 aa15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 OR6C3Q9NZP0 311 aa15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 FUT9Q9Y231 359 aa15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 RBM7Q9Y580 266 aaKnown RBP15.33■□□□□ 0.04
TNFRSF8-205ENST00000514649 ESPL1Q14674 2120 aa15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 WNT2P09544 360 aa15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 HLA-BQ31612 363 aa15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 NRN1LQ496H8 165 aa15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 ARSJQ5FYB0 599 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 ZNF705AQ6ZN79 300 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 RNASE8Q8TDE3 154 aaKnown RBP15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 GATAD1Q8WUU5 269 aa15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 OR5P3Q8WZ94 311 aa15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 ANAPC16Q96DE5 110 aa15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 ZDBF2Q9HCK1 2354 aa15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 PINLYPA6NC86 204 aa15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 WDR1O75083 606 aa15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 GDF1P27539 372 aa15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 CNN1P51911 297 aaKnown RBP15.32■□□□□ 0.04
TNFRSF8-205ENST00000514649 ACSM6Q6P461 480 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms