RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 RBM39Q14498 530 aaKnown RBP13.64□□□□□ -0.23
HMGCL-209ENST00000513148 PIGYQ3MUY2 71 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 TMED4Q7Z7H5 227 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 H1FXQ92522 213 aaKnown RBP13.64□□□□□ -0.23
HMGCL-209ENST00000513148 TMEM68Q96MH6 324 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 ATG5Q9H1Y0 275 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 TMEM231Q9H6L2 316 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 LOC105371242A0A075B767 164 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 C22orf46C9J442 243 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 SIRPB1O00241 398 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 AMY2AP04746 511 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 ZNF146Q15072 292 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 C9orf152Q5JTZ5 239 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 SPIN3Q5JUX0 258 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 DHRS11Q6UWP2 260 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 ASCL4Q6XD76 172 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 OR56B1Q8NGI3 324 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 OR13C8Q8NGS7 320 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 SEC22AQ96IW7 307 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 RNF126Q9BV68 326 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 KCNK15Q9H427 330 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 RPS10P5Q9NQ39 176 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 A0A0B4J2A0 478 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 C7orf77A4D0Y5 90 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 ZNF736B4DX44 427 aaPredicted RBP13.63□□□□□ -0.23
HMGCL-209ENST00000513148 SLC17A2O00624 439 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 S100A2P29034 98 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 PYY3Q5JQD4 70 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 ARRDC1Q8N5I2 433 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 FAM46BQ96A09 425 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 SELENOIQ9C0D9 397 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 HRH4Q9H3N8 390 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 BANF2Q9H503 90 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 IL36GQ9NZH8 169 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 SHPKQ9UHJ6 478 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 FAM96BQ9Y3D0 163 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 TMED3Q9Y3Q3 217 aa13.63□□□□□ -0.23
HMGCL-209ENST00000513148 INAFM1C9JVW0 142 aa13.62□□□□□ -0.23
HMGCL-209ENST00000513148 OR2H2O95918 312 aa13.62□□□□□ -0.23
HMGCL-209ENST00000513148 CHRM2P08172 466 aa13.62□□□□□ -0.23
HMGCL-209ENST00000513148 GABRR1P24046 479 aa13.62□□□□□ -0.23
HMGCL-209ENST00000513148 HTR2CP28335 458 aa13.62□□□□□ -0.23
HMGCL-209ENST00000513148 PKIAP61925 76 aa13.62□□□□□ -0.23
HMGCL-209ENST00000513148 GUCA2AQ02747 115 aa13.62□□□□□ -0.23
HMGCL-209ENST00000513148 SSX2Q16385 188 aa13.62□□□□□ -0.23
HMGCL-209ENST00000513148 LRRC37A5PQ49AS3 106 aa13.62□□□□□ -0.23
HMGCL-209ENST00000513148 OSR2Q8N2R0 312 aa13.62□□□□□ -0.23
HMGCL-209ENST00000513148 BPIFB2Q8N4F0 458 aa13.62□□□□□ -0.23
HMGCL-209ENST00000513148 PTX4Q96A99 478 aa13.62□□□□□ -0.23
HMGCL-209ENST00000513148 GAR1Q9NY12 217 aaKnown RBP13.62□□□□□ -0.23
HMGCL-209ENST00000513148 ST3GAL6Q9Y274 331 aa13.62□□□□□ -0.23
HMGCL-209ENST00000513148 WNK2Q9Y3S1 2297 aa13.62□□□□□ -0.23
HMGCL-209ENST00000513148 HSPB6O14558 160 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 SH2D1BO14796 132 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 CRTAPO75718 401 aaPredicted RBP13.61□□□□□ -0.23
HMGCL-209ENST00000513148 ATXN7L3Q14CW9 347 aaPredicted RBP13.61□□□□□ -0.23
HMGCL-209ENST00000513148 C2orf76Q3KRA6 126 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 C1orf100Q5SVJ3 147 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 IL17RELQ6ZVW7 336 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 TMEM104Q8NE00 496 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 DCUN1D4Q92564 292 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 FAM3DQ96BQ1 224 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 C1orf147Q96MC9 270 aaPredicted RBP13.61□□□□□ -0.23
HMGCL-209ENST00000513148 NEU1Q99519 415 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 NUDT16L1Q9BRJ7 211 aaKnown RBP13.61□□□□□ -0.23
HMGCL-209ENST00000513148 PRDM13Q9H4Q3 707 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 IGHV2-70DA0A0C4DH43 119 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 PSPNO60542 156 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 TK1P04183 234 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 RBM11P57052 281 aaKnown RBP13.61□□□□□ -0.23
HMGCL-209ENST00000513148 TAS2R31P59538 309 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 RAB11BQ15907 218 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 CR1LQ2VPA4 569 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 PRSS54Q6PEW0 395 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 OR51D1Q8NGF3 324 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 ZNF581Q9P0T4 197 aa13.61□□□□□ -0.23
HMGCL-209ENST00000513148 POLR3KQ9Y2Y1 108 aaPredicted RBP13.61□□□□□ -0.23
HMGCL-209ENST00000513148 SONP18583 2426 aaKnown RBP13.61□□□□□ -0.23
HMGCL-209ENST00000513148 HIVEP2P31629 2446 aa13.6□□□□□ -0.23
HMGCL-209ENST00000513148 MTORP42345 2549 aa13.6□□□□□ -0.23
HMGCL-209ENST00000513148 A0A1B0GV90 55 aa13.6□□□□□ -0.23
HMGCL-209ENST00000513148 SEC14L6B5MCN3 397 aa13.6□□□□□ -0.23
HMGCL-209ENST00000513148 GEMIN2O14893 280 aaKnown RBP13.6□□□□□ -0.23
HMGCL-209ENST00000513148 DEGS1O15121 323 aa13.6□□□□□ -0.23
HMGCL-209ENST00000513148 ZNF737O75373 536 aa13.6□□□□□ -0.23
HMGCL-209ENST00000513148 TBPP20226 339 aa13.6□□□□□ -0.23
HMGCL-209ENST00000513148 PAX2Q02962 417 aa13.6□□□□□ -0.23
HMGCL-209ENST00000513148 PLA2G7Q13093 441 aa13.6□□□□□ -0.23
HMGCL-209ENST00000513148 EDDM3AQ14507 147 aa13.6□□□□□ -0.23
HMGCL-209ENST00000513148 BTNL3Q6UXE8 466 aa13.6□□□□□ -0.23
HMGCL-209ENST00000513148 ZNF383Q8NA42 475 aa13.6□□□□□ -0.23
HMGCL-209ENST00000513148 OR51T1Q8NGJ9 327 aa13.6□□□□□ -0.23
HMGCL-209ENST00000513148 RPUSD1Q9UJJ7 312 aaKnown RBP13.6□□□□□ -0.23
HMGCL-209ENST00000513148 VSIG4Q9Y279 399 aa13.6□□□□□ -0.23
HMGCL-209ENST00000513148 INSIG2Q9Y5U4 225 aa13.6□□□□□ -0.23
HMGCL-209ENST00000513148 NSD1Q96L73 2696 aaPredicted RBP13.59□□□□□ -0.23
HMGCL-209ENST00000513148 K7N7A8 449 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 ENSAO43768 121 aaKnown RBP13.59□□□□□ -0.23
HMGCL-209ENST00000513148 OR7C1O76099 320 aaPredicted RBP13.59□□□□□ -0.23
HMGCL-209ENST00000513148 EFNB2P52799 333 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms