RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 ANKRD12Q6UB98 2062 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 TRGV11A0A075B6L2 103 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 APOC4P55056 127 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 GP2P55259 537 aaKnown RBP7.71□□□□□ -1.18
VCAN-208ENST00000512590 ZNF430Q9H8G1 570 aaPredicted RBP7.71□□□□□ -1.18
VCAN-208ENST00000512590 TCRBV5S2A0A599 114 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 PEX7O00628 323 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 CD3DP04234 171 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 AMY1AP04745 511 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 CD7P09564 240 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 LINC00869P0C866 280 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 HIST1H1DP16402 221 aaKnown RBP7.7□□□□□ -1.18
VCAN-208ENST00000512590 OR10J1P30954 320 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 ACVR1Q04771 509 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 SYS1Q8N2H4 156 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 LRTM2Q8N967 370 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 Q96MF0 132 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 FAM206AQ9NX38 181 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 KLK5Q9Y337 293 aaPredicted RBP7.7□□□□□ -1.18
VCAN-208ENST00000512590 TGIF2-C20orf24A0A0A6YYL0 155 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 MIDNQ504T8 468 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 LAX1Q8IWV1 398 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 ASB10Q8WXI3 467 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 NRIP2Q9BQI9 281 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 MRPL16Q9NX20 251 aaKnown RBP7.7□□□□□ -1.18
VCAN-208ENST00000512590 SERGEFQ9UGK8 458 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 GPR132Q9UNW8 380 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 SLC25A15Q9Y619 301 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 MYOM1P52179 1685 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 MYO9BQ13459 2157 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 IGHV1-45A0A0A0MS14 117 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 B4DSR2 109 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 IGLV3-27P01718 113 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 ZNF585BQ52M93 769 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 TIMM23BQ5SRD1 257 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 DPPA3Q6W0C5 159 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 VN1R17PQ8TDU5 208 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 FBLIM1Q8WUP2 373 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 SCGB3A1Q96QR1 104 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 TRBV20OR9-2A0A075B6H5 130 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 LOC101059948A0A1B0GTJ6 334 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 H3BMM0 161 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 CA11O75493 328 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 TMEM95Q3KNT9 176 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 LCNL1Q6ZST4 164 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 GLMPQ8WWB7 406 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 UBE2WQ96B02 151 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 KCNE3Q9Y6H6 103 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 ODAMA1E959 279 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 OR11H12B2RN74 326 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 PPP6CO00743 305 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 DAPP51397 102 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 SPCS2Q15005 226 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 LINC01356Q8N9X3 169 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 HSF4Q9ULV5 492 aa7.7□□□□□ -1.18
VCAN-208ENST00000512590 AP4M1O00189 453 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 B4GALT3O60512 393 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 ZP1P60852 638 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 FAM27E3Q08E93 113 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 ALKAL1Q6UXT8 129 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 ARRDC1Q8N5I2 433 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 TMEM229BQ8NBD8 167 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 UCN2Q96RP3 112 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 CDCA4Q9BXL8 241 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 OR51M1Q9H341 326 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 LAMTOR3Q9UHA4 124 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 MYO10Q9HD67 2058 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 SLC25A16P16260 332 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 DYNLT3P51808 116 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 MPV17LQ2QL34 196 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 ADAT3Q96EY9 351 aaPredicted RBP7.69□□□□□ -1.18
VCAN-208ENST00000512590 C7orf71A4D174 169 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 FBLL1A6NHQ2 334 aaKnown RBP7.69□□□□□ -1.18
VCAN-208ENST00000512590 FOXB2Q5VYV0 432 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 LSM10Q969L4 123 aaKnown RBP7.69□□□□□ -1.18
VCAN-208ENST00000512590 NTN4Q9HB63 628 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 S4R3C0 116 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 TMEM272A0A1B0GTI8 110 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 LOC390937A0A1W2PQ73 354 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 HOXB1P14653 301 aaPredicted RBP7.69□□□□□ -1.18
VCAN-208ENST00000512590 UCP1P25874 307 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 RBMY1FQ15415 496 aaKnown RBP7.69□□□□□ -1.18
VCAN-208ENST00000512590 TSPO2Q5TGU0 170 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 FOXJ2Q9P0K8 574 aa7.69□□□□□ -1.18
VCAN-208ENST00000512590 GON4LQ3T8J9 2241 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 TMEM127O75204 238 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 TEX38Q6PEX7 206 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 ZNRF1Q8ND25 227 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 CLDND2Q8NHS1 167 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 HDHD3Q9BSH5 251 aaPredicted RBP7.68□□□□□ -1.18
VCAN-208ENST00000512590 RBKSQ9H477 322 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 PXMP4Q9Y6I8 212 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 DCTDP32321 178 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 MEF2CQ06413 473 aaPredicted RBP7.68□□□□□ -1.18
VCAN-208ENST00000512590 PSMG3Q9BT73 122 aaPredicted RBP7.68□□□□□ -1.18
VCAN-208ENST00000512590 QTRT1Q9BXR0 403 aaKnown RBP7.68□□□□□ -1.18
VCAN-208ENST00000512590 PAGE4O60829 102 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 LSM6P62312 80 aaKnown RBP7.68□□□□□ -1.18
VCAN-208ENST00000512590 AANATQ16613 207 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 CLLU1Q5K131 121 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms