RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 HMGN3Q15651 99 aa14.25□□□□□ -0.13
HMGCS1-206ENST00000511774 DEFB114Q30KQ6 69 aa14.25□□□□□ -0.13
HMGCS1-206ENST00000511774 GLIPR1L1Q6UWM5 242 aa14.25□□□□□ -0.13
HMGCS1-206ENST00000511774 GHSRQ92847 366 aa14.25□□□□□ -0.13
HMGCS1-206ENST00000511774 SLC7A6OSQ96CW6 309 aaPredicted RBP14.25□□□□□ -0.13
HMGCS1-206ENST00000511774 WDR89Q96FK6 387 aaPredicted RBP14.25□□□□□ -0.13
HMGCS1-206ENST00000511774 Q96M66 194 aa14.25□□□□□ -0.13
HMGCS1-206ENST00000511774 AGMATQ9BSE5 352 aa14.25□□□□□ -0.13
HMGCS1-206ENST00000511774 DNAH17Q9UFH2 4485 aa14.24□□□□□ -0.13
HMGCS1-206ENST00000511774 RAB29O14966 203 aa14.24□□□□□ -0.13
HMGCS1-206ENST00000511774 SLC22A1O15245 554 aa14.24□□□□□ -0.13
HMGCS1-206ENST00000511774 CD2P06729 351 aa14.24□□□□□ -0.13
HMGCS1-206ENST00000511774 MC5RP33032 325 aa14.24□□□□□ -0.13
HMGCS1-206ENST00000511774 MEDAGQ5VYS4 303 aa14.24□□□□□ -0.13
HMGCS1-206ENST00000511774 GALMQ96C23 342 aa14.24□□□□□ -0.13
HMGCS1-206ENST00000511774 SELENOIQ9C0D9 397 aa14.24□□□□□ -0.13
HMGCS1-206ENST00000511774 PIPOXQ9P0Z9 390 aa14.24□□□□□ -0.13
HMGCS1-206ENST00000511774 SAC3D1A6NKF1 404 aa14.23□□□□□ -0.13
HMGCS1-206ENST00000511774 LIMS3P0CW19 117 aa14.23□□□□□ -0.13
HMGCS1-206ENST00000511774 LIMS4P0CW20 117 aa14.23□□□□□ -0.13
HMGCS1-206ENST00000511774 APELAP0DMC3 54 aa14.23□□□□□ -0.13
HMGCS1-206ENST00000511774 MGMTP16455 207 aa14.23□□□□□ -0.13
HMGCS1-206ENST00000511774 GUCA2BQ16661 112 aa14.23□□□□□ -0.13
HMGCS1-206ENST00000511774 ZNF383Q8NA42 475 aa14.23□□□□□ -0.13
HMGCS1-206ENST00000511774 IL1F10Q8WWZ1 152 aa14.23□□□□□ -0.13
HMGCS1-206ENST00000511774 MRPL48Q96GC5 212 aaKnown RBP14.23□□□□□ -0.13
HMGCS1-206ENST00000511774 RNF5Q99942 180 aa14.23□□□□□ -0.13
HMGCS1-206ENST00000511774 ZC4H2Q9NQZ6 224 aa14.23□□□□□ -0.13
HMGCS1-206ENST00000511774 FAM90A23PA8MXZ1 464 aa14.22□□□□□ -0.13
HMGCS1-206ENST00000511774 GYG2O15488 501 aa14.22□□□□□ -0.13
HMGCS1-206ENST00000511774 PDCD6O75340 191 aa14.22□□□□□ -0.13
HMGCS1-206ENST00000511774 IGLV2-23P01705 113 aa14.22□□□□□ -0.13
HMGCS1-206ENST00000511774 GLAP06280 429 aa14.22□□□□□ -0.13
HMGCS1-206ENST00000511774 RPS16P62249 146 aaKnown RBP14.22□□□□□ -0.13
HMGCS1-206ENST00000511774 MRPL28Q13084 256 aaKnown RBP14.22□□□□□ -0.13
HMGCS1-206ENST00000511774 GPR176Q14439 515 aa14.22□□□□□ -0.13
HMGCS1-206ENST00000511774 TATDN3Q17R31 274 aa14.22□□□□□ -0.13
HMGCS1-206ENST00000511774 MRGPRG-AS1Q2M3A8 158 aa14.22□□□□□ -0.13
HMGCS1-206ENST00000511774 OR52I1Q8NGK6 324 aa14.22□□□□□ -0.13
HMGCS1-206ENST00000511774 SULT4A1Q9BR01 284 aa14.22□□□□□ -0.13
HMGCS1-206ENST00000511774 DYNC1H1Q14204 4646 aaKnown RBP14.22□□□□□ -0.13
HMGCS1-206ENST00000511774 FAM90A7PA6NKC0 464 aa14.21□□□□□ -0.13
HMGCS1-206ENST00000511774 GPX5O75715 221 aa14.21□□□□□ -0.13
HMGCS1-206ENST00000511774 SPDEFO95238 335 aa14.21□□□□□ -0.13
HMGCS1-206ENST00000511774 CRYGBP07316 175 aa14.21□□□□□ -0.13
HMGCS1-206ENST00000511774 AADACP22760 399 aa14.21□□□□□ -0.13
HMGCS1-206ENST00000511774 PRR20EP86478 221 aa14.21□□□□□ -0.13
HMGCS1-206ENST00000511774 PRR20CP86479 221 aa14.21□□□□□ -0.13
HMGCS1-206ENST00000511774 PRR20DP86480 221 aa14.21□□□□□ -0.13
HMGCS1-206ENST00000511774 PRR20BP86481 221 aa14.21□□□□□ -0.13
HMGCS1-206ENST00000511774 PRR20AP86496 221 aa14.21□□□□□ -0.13
HMGCS1-206ENST00000511774 ZIK1Q3SY52 487 aaPredicted RBP14.21□□□□□ -0.13
HMGCS1-206ENST00000511774 LYG2Q86SG7 212 aa14.21□□□□□ -0.13
HMGCS1-206ENST00000511774 TSNAXQ99598 290 aaKnown RBP14.21□□□□□ -0.13
HMGCS1-206ENST00000511774 PEMTQ9UBM1 199 aa14.21□□□□□ -0.13
HMGCS1-206ENST00000511774 AP4S1Q9Y587 144 aa14.21□□□□□ -0.13
HMGCS1-206ENST00000511774 TRBV5-5A0A0J9YX44 114 aa14.2□□□□□ -0.14
HMGCS1-206ENST00000511774 MSGN1A6NI15 193 aa14.2□□□□□ -0.14
HMGCS1-206ENST00000511774 CPEP16870 476 aa14.2□□□□□ -0.14
HMGCS1-206ENST00000511774 KIR2DS2P43631 304 aa14.2□□□□□ -0.14
HMGCS1-206ENST00000511774 TNFRSF9Q07011 255 aa14.2□□□□□ -0.14
HMGCS1-206ENST00000511774 DNAL1Q4LDG9 190 aa14.2□□□□□ -0.14
HMGCS1-206ENST00000511774 LGALS9CQ6DKI2 356 aa14.2□□□□□ -0.14
HMGCS1-206ENST00000511774 RPL22L1Q6P5R6 122 aaKnown RBP14.2□□□□□ -0.14
HMGCS1-206ENST00000511774 JAGN1Q8N5M9 183 aa14.2□□□□□ -0.14
HMGCS1-206ENST00000511774 SNAPC3Q92966 411 aa14.2□□□□□ -0.14
HMGCS1-206ENST00000511774 GGTLC1Q9BX51 225 aa14.2□□□□□ -0.14
HMGCS1-206ENST00000511774 COA4Q9NYJ1 87 aa14.2□□□□□ -0.14
HMGCS1-206ENST00000511774 OR1A1Q9P1Q5 309 aa14.2□□□□□ -0.14
HMGCS1-206ENST00000511774 STEAP1Q9UHE8 339 aa14.2□□□□□ -0.14
HMGCS1-206ENST00000511774 DMRT1Q9Y5R6 373 aa14.2□□□□□ -0.14
HMGCS1-206ENST00000511774 C2orf70A6NJV1 201 aa14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 AIREO43918 545 aa14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 CRTAPO75718 401 aaPredicted RBP14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 LALBAP00709 142 aa14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 PRH1P02810 166 aa14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 RPS11P62280 158 aaKnown RBP eCLIP14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 OR2G6Q5TZ20 316 aa14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 AWAT2Q6E213 333 aa14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 SVOPQ8N4V2 548 aa14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 CCDC197Q8NCU1 140 aa14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 ADAD2Q8NCV1 583 aaKnown RBP14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 DYNLRB2Q8TF09 96 aa14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 CACNG8Q8WXS5 425 aa14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 FAM46BQ96A09 425 aa14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 USMG5Q96IX5 58 aa14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 FAAP24Q9BTP7 215 aa14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 C11orf54Q9H0W9 315 aaPredicted RBP14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 ZNF230Q9UIE0 474 aaPredicted RBP14.19□□□□□ -0.14
HMGCS1-206ENST00000511774 DNAH11Q96DT5 4516 aa14.18□□□□□ -0.14
HMGCS1-206ENST00000511774 A0A1W2PPK0 400 aa14.18□□□□□ -0.14
HMGCS1-206ENST00000511774 ALPLP05186 524 aa14.18□□□□□ -0.14
HMGCS1-206ENST00000511774 FOLR2P14207 255 aa14.18□□□□□ -0.14
HMGCS1-206ENST00000511774 ZNF45Q02386 682 aa14.18□□□□□ -0.14
HMGCS1-206ENST00000511774 ZNF880Q6PDB4 577 aa14.18□□□□□ -0.14
HMGCS1-206ENST00000511774 WFDC3Q8IUB2 231 aa14.18□□□□□ -0.14
HMGCS1-206ENST00000511774 KCNG3Q8TAE7 436 aa14.18□□□□□ -0.14
HMGCS1-206ENST00000511774 CENPNQ96H22 339 aaPredicted RBP14.18□□□□□ -0.14
HMGCS1-206ENST00000511774 AKIP1Q9NQ31 210 aa14.18□□□□□ -0.14
HMGCS1-206ENST00000511774 OGG1O15527 345 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms