RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 ZNF585BQ52M93 769 aa12.49□□□□□ -0.41
SCLT1-209ENST00000511426 INO80EQ8NBZ0 244 aaPredicted RBP12.49□□□□□ -0.41
SCLT1-209ENST00000511426 OR4D5Q8NGN0 318 aa12.49□□□□□ -0.41
SCLT1-209ENST00000511426 GRPEL2Q8TAA5 225 aa12.49□□□□□ -0.41
SCLT1-209ENST00000511426 C5orf30Q96GV9 206 aa12.49□□□□□ -0.41
SCLT1-209ENST00000511426 SSBP3Q9BWW4 388 aaPredicted RBP12.49□□□□□ -0.41
SCLT1-209ENST00000511426 PLEKHA2Q9HB19 425 aa12.49□□□□□ -0.41
SCLT1-209ENST00000511426 GSKIPQ9P0R6 139 aa12.49□□□□□ -0.41
SCLT1-209ENST00000511426 CACFD1Q9UGQ2 172 aa12.49□□□□□ -0.41
SCLT1-209ENST00000511426 SESN1Q9Y6P5 492 aa12.49□□□□□ -0.41
SCLT1-209ENST00000511426 PPIAL4CA0A0B4J2A2 164 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 MEX3AA1L020 520 aaKnown RBP12.48□□□□□ -0.41
SCLT1-209ENST00000511426 ARPC5O15511 151 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 ST8SIA3O43173 380 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 LY6HO94772 140 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 PPIAL4GP0DN37 164 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 IGHV1-8P0DP01 117 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 NUP62P37198 522 aaPredicted RBP12.48□□□□□ -0.41
SCLT1-209ENST00000511426 ZNF137PP52743 207 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 RAB32Q13637 225 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 LRRC37A5PQ49AS3 106 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 SP5Q6BEB4 398 aaPredicted RBP12.48□□□□□ -0.41
SCLT1-209ENST00000511426 ACOT7LQ6ZUV0 252 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 SPAG16Q8N0X2 631 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 OR9G1Q8NH87 305 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 MFFQ9GZY8 342 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 ABCA4P78363 2273 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 A8MXK9 166 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 M0R1W7 72 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 DEDDO75618 318 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 HPRT1P00492 218 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 MMP9P14780 707 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 ZNF16P17020 682 aaPredicted RBP12.48□□□□□ -0.41
SCLT1-209ENST00000511426 IL3RAP26951 378 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 S100A11P31949 105 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 AKR1C2P52895 323 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 FAM53AQ6NSI3 398 aaPredicted RBP12.48□□□□□ -0.41
SCLT1-209ENST00000511426 C1orf122Q6ZSJ8 110 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 KIR3DL3Q8N743 410 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 RNASE11Q8TAA1 199 aaKnown RBP12.48□□□□□ -0.41
SCLT1-209ENST00000511426 TMEM186Q96B77 213 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 GPHA2Q96T91 129 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 MBD2Q9UBB5 411 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 MMP24Q9Y5R2 645 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 POMT1Q9Y6A1 747 aa12.48□□□□□ -0.41
SCLT1-209ENST00000511426 KIAA2026Q5HYC2 2103 aa12.47□□□□□ -0.41
SCLT1-209ENST00000511426 SAA2-SAA4A0A096LPE2 208 aa12.47□□□□□ -0.41
SCLT1-209ENST00000511426 FAM90A9PA6NNJ1 464 aa12.47□□□□□ -0.41
SCLT1-209ENST00000511426 FAM90A26D6RGX4 464 aa12.47□□□□□ -0.41
SCLT1-209ENST00000511426 M0R1X1 148 aa12.47□□□□□ -0.41
SCLT1-209ENST00000511426 MMP23AO75900 390 aa12.47□□□□□ -0.41
SCLT1-209ENST00000511426 SAA2P0DJI9 122 aaPredicted RBP12.47□□□□□ -0.41
SCLT1-209ENST00000511426 ERVFRD-1P60508 538 aa12.47□□□□□ -0.41
SCLT1-209ENST00000511426 RPL30P62888 115 aaKnown RBP12.47□□□□□ -0.41
SCLT1-209ENST00000511426 DHRS7BQ6IAN0 325 aaPredicted RBP12.47□□□□□ -0.41
SCLT1-209ENST00000511426 ZNF833PQ6ZTB9 187 aa12.47□□□□□ -0.41
SCLT1-209ENST00000511426 ODF3L1Q8IXM7 274 aa12.47□□□□□ -0.41
SCLT1-209ENST00000511426 LYG1Q8N1E2 194 aa12.47□□□□□ -0.41
SCLT1-209ENST00000511426 KCNRGQ8N5I3 272 aa12.47□□□□□ -0.41
SCLT1-209ENST00000511426 ZNF251Q9BRH9 671 aa12.47□□□□□ -0.41
SCLT1-209ENST00000511426 RNF126Q9BV68 326 aa12.47□□□□□ -0.41
SCLT1-209ENST00000511426 TMEM133Q9H2Q1 129 aa12.47□□□□□ -0.41
SCLT1-209ENST00000511426 E5RGE8 158 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 J3QKU1 62 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 SLC31A2O15432 143 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 PROP1O75360 226 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 PITX3O75364 302 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 IGHV2-5P01817 119 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 RRASP10301 218 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 CXCL2P19875 107 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 PVALBP20472 110 aaPredicted RBP12.46□□□□□ -0.41
SCLT1-209ENST00000511426 LPAR6P43657 344 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 NKX2-1P43699 371 aaPredicted RBP12.46□□□□□ -0.41
SCLT1-209ENST00000511426 C11orf42Q8N5U0 333 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 OR4S2Q8NH73 311 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 DDB2Q92466 427 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 AQP10Q96PS8 301 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 AIFM2Q9BRQ8 373 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 PLSCR3Q9NRY6 295 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 NSG2Q9Y328 171 aa12.46□□□□□ -0.41
SCLT1-209ENST00000511426 SMG1Q96Q15 3661 aaKnown RBP12.46□□□□□ -0.42
SCLT1-209ENST00000511426 EPG5Q9HCE0 2579 aa12.46□□□□□ -0.42
SCLT1-209ENST00000511426 LOC105371242A0A075B767 164 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 LINC00473A8K010 186 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 J3QR06 171 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 NDUFS7O75251 213 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 IGKV1-39P01597 117 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 IGHV4-39P01824 125 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 IGKV1D-39P04432 117 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 DSCR9P59020 149 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 S100A10P60903 97 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 FAM71E2Q8N5Q1 922 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 BEND2Q8NDZ0 799 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 DCUN1D4Q92564 292 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 H0YIZ8 118 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 K7EPK0 472 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 ENSAO43768 121 aaKnown RBP12.45□□□□□ -0.42
SCLT1-209ENST00000511426 MBPP02686 304 aaPredicted RBP12.45□□□□□ -0.42
SCLT1-209ENST00000511426 PLA2G2AP14555 144 aa12.45□□□□□ -0.42
SCLT1-209ENST00000511426 GNG10P50151 68 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms