RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CDC42EP2O14613 210 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 EEF1E1O43324 174 aaKnown RBP3.71□□□□□ -1.82
NIPBL-206ENST00000509429 FGF17O60258 216 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 TBL1XO60907 577 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 GABARAPO95166 117 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 CLDN14O95500 239 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 TBX6O95947 436 aaPredicted RBP3.71□□□□□ -1.82
NIPBL-206ENST00000509429 HLA-DQA2P01906 255 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 OR4A8P0C604 315 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 NHLRC4P0CG21 123 aaPredicted RBP3.71□□□□□ -1.82
NIPBL-206ENST00000509429 CD58P19256 250 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 BCL3P20749 454 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 TAF6P49848 677 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 KRTAP10-3P60369 221 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 FABP5Q01469 135 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 SP4Q02446 784 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 PIGFQ07326 219 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 PMAIP1Q13794 54 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 HMGN3Q15651 99 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 CTF1Q16619 201 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 TMEM52BQ4KMG9 183 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 LRRC10Q5BKY1 277 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 RASL11AQ6T310 242 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 TMEM64Q6YI46 380 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 PRSS41Q7RTY9 318 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF571Q7Z3V5 609 aaPredicted RBP3.71□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF440Q8IYI8 595 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 PRELID2Q8N945 189 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 GPR26Q8NDV2 337 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 OR2T12Q8NG77 320 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 OR7A2PQ8NGA2 310 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 OR51T1Q8NGJ9 327 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 NEIL3Q8TAT5 605 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 C11orf45Q8TAV5 145 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 ZPLD1Q8TCW7 415 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 C15orf40Q8WUR7 153 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.71□□□□□ -1.82
NIPBL-206ENST00000509429 TSLPQ969D9 159 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 PLEKHB2Q96CS7 222 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 SLAMF6Q96DU3 332 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 PCED1BQ96HM7 432 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 GMPPAQ96IJ6 420 aaPredicted RBP3.71□□□□□ -1.82
NIPBL-206ENST00000509429 CIB3Q96Q77 187 aaPredicted RBP3.71□□□□□ -1.82
NIPBL-206ENST00000509429 OR4C12Q96R67 309 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 LYSMD1Q96S90 227 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 KIR2DL4Q99706 377 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 HIST1H2BLQ99880 126 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 FOXC2Q99958 501 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 PRADC1Q9BSG0 188 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 RTBDNQ9BSG5 229 aaPredicted RBP3.71□□□□□ -1.82
NIPBL-206ENST00000509429 LRRC61Q9BV99 259 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF471Q9BX82 626 aaPredicted RBP3.71□□□□□ -1.82
NIPBL-206ENST00000509429 HES7Q9BYE0 225 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 SLC25A31Q9H0C2 315 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 TMEM222Q9H0R3 208 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 POLR2J3Q9H1A7 115 aaKnown RBP3.71□□□□□ -1.82
NIPBL-206ENST00000509429 MOB1AQ9H8S9 216 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 ELL3Q9HB65 397 aaPredicted RBP3.71□□□□□ -1.82
NIPBL-206ENST00000509429 SDR39U1Q9NRG7 319 aaPredicted RBP3.71□□□□□ -1.82
NIPBL-206ENST00000509429 TMEM30AQ9NV96 361 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 COMMD9Q9P000 198 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 KLK11Q9UBX7 282 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 RIMS3Q9UJD0 308 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 MRPS16Q9Y3D3 137 aaKnown RBP3.71□□□□□ -1.82
NIPBL-206ENST00000509429 IER3IP1Q9Y5U9 82 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 R4GN57 208 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 COL2A1P02458 1487 aaPredicted RBP3.71□□□□□ -1.82
NIPBL-206ENST00000509429 A0A0B4J2A0 478 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 A0A0D9SG52 128 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 FAM236DA0A1B0GTK5 79 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 TCRBV9S1A1TA0A576 114 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 TMEM212A6NML5 194 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF732B4DXR9 585 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 C2CD4DB7Z1M9 353 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 K7EPK0 472 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 RHODO00212 210 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF354AO60765 605 aaPredicted RBP3.7□□□□□ -1.82
NIPBL-206ENST00000509429 CSN2P05814 226 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 H1F0P07305 194 aaKnown RBP3.7□□□□□ -1.82
NIPBL-206ENST00000509429 SOD3P08294 240 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 CD14P08571 375 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 LGALS1P09382 135 aaKnown RBP3.7□□□□□ -1.82
NIPBL-206ENST00000509429 OR5AL1P0C617 328 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 LINC00694P0DN24 101 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 FAM236CP0DP71 79 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 ERGP11308 486 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 FABP4P15090 132 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 CD1DP15813 335 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 HIST1H1DP16402 221 aaKnown RBP3.7□□□□□ -1.82
NIPBL-206ENST00000509429 GNB3P16520 340 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 GALR1P47211 349 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 CLDN17P56750 224 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 UBE2NP61088 152 aaKnown RBP3.7□□□□□ -1.82
NIPBL-206ENST00000509429 SNRPFP62306 86 aaKnown RBP3.7□□□□□ -1.82
NIPBL-206ENST00000509429 GRB2P62993 217 aaKnown RBP3.7□□□□□ -1.82
NIPBL-206ENST00000509429 LTBQ06643 244 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 FAM27E3Q08E93 113 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 IHHQ14623 411 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 TRIP6Q15654 476 aaKnown RBP3.7□□□□□ -1.82
NIPBL-206ENST00000509429 TWIST1Q15672 202 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms