RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 CD300LFQ8TDQ1 290 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 NEK7Q8TDX7 302 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 CACNG8Q8WXS5 425 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 RFT1Q96AA3 541 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 MCUR1Q96AQ8 359 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 TMEM68Q96MH6 324 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 C17orf77Q96MU5 243 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 ATG101Q9BSB4 218 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 FUZQ9BT04 418 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 CHRDL1Q9BU40 450 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 COMMD4Q9H0A8 199 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 MOB1AQ9H8S9 216 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 LINC00574Q9H8X3 128 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 MED20Q9H944 212 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 RHOFQ9HBH0 211 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 IL1RAPQ9NPH3 570 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 GID8Q9NWU2 228 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 FAM206AQ9NX38 181 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 NUFIP1Q9UHK0 495 aaKnown RBP2.8□□□□□ -1.96
RNF4-211ENST00000509206 OR52A1Q9UKL2 312 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 GAB2Q9UQC2 676 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 V9GYS6 101 aa2.8□□□□□ -1.96
RNF4-211ENST00000509206 TMEM30CPA0ZSE6 113 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 OR4C46A6NHA9 309 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 DHRS7CA6NNS2 312 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 SLC31A2O15432 143 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 KDM4BO94953 1096 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 NDUFA3O95167 84 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 CA1P00915 261 aaPredicted RBP2.79□□□□□ -1.96
RNF4-211ENST00000509206 HLA-AP01891 365 aaKnown RBP2.79□□□□□ -1.96
RNF4-211ENST00000509206 TTRP02766 147 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 DBTP11182 482 aaKnown RBP2.79□□□□□ -1.96
RNF4-211ENST00000509206 EPHA2P29317 976 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 MC5RP33032 325 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 VHLP40337 213 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 GSSP48637 474 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 CCR9P51686 369 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 HCCSP53701 268 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 EXOSC2Q13868 293 aaKnown RBP2.79□□□□□ -1.96
RNF4-211ENST00000509206 Q3ZCU0 254 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 ZNF585BQ52M93 769 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 CT45A1Q5HYN5 189 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 SLC25A30Q5SVS4 291 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 ATAD3CQ5T2N8 411 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 LINC01590Q5TEZ4 76 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 CFAP161Q6P656 301 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 ZNF679Q8IYX0 411 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 ELMOD2Q8IZ81 293 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 STX19Q8N4C7 294 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 CCDC54Q8NEL0 328 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 OR5D18Q8NGL1 313 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 CT45A3Q8NHU0 189 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 CNIH3Q8TBE1 160 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 TMEM163Q8TC26 289 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 ASB17Q8WXJ9 295 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 GHSRQ92847 366 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 TSNAXQ99598 290 aaKnown RBP2.79□□□□□ -1.96
RNF4-211ENST00000509206 SPAG8Q99932 426 aaPredicted RBP2.79□□□□□ -1.96
RNF4-211ENST00000509206 EBF4Q9BQW3 602 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 MRPL20Q9BYC9 149 aaKnown RBP2.79□□□□□ -1.96
RNF4-211ENST00000509206 KRTAP4-9Q9BYQ8 210 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 NMNAT2Q9BZQ4 307 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 OR2S2Q9NQN1 319 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 INTS9Q9NV88 658 aaKnown RBP2.79□□□□□ -1.96
RNF4-211ENST00000509206 NKIRAS1Q9NYS0 192 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 MLXQ9UH92 298 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 TRAPPC2LQ9UL33 140 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 AP3M1Q9Y2T2 418 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 EXOSC1Q9Y3B2 195 aaKnown RBP2.79□□□□□ -1.96
RNF4-211ENST00000509206 TMEM14AQ9Y6G1 99 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 R4GMQ9 66 aa2.79□□□□□ -1.96
RNF4-211ENST00000509206 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.78□□□□□ -1.96
RNF4-211ENST00000509206 IGHV4-28A0A0C4DH34 117 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 NBDYA0A0U1RRE5 68 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 A0A1B0GTI1 187 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 PGPEP1LA6NFU8 196 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 FAM223BA6NKX1 122 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 NPIPB5A8MRT5 1133 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 KRTAP29-1A8MX34 341 aaPredicted RBP2.78□□□□□ -1.96
RNF4-211ENST00000509206 PPP5D1E7EU14 171 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 AIPO00170 330 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 MRASO14807 208 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 TSPAN4O14817 238 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 ARPC2O15144 300 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 ORC5O43913 435 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 MRPS14O60783 128 aaKnown RBP2.78□□□□□ -1.96
RNF4-211ENST00000509206 RBBP9O75884 186 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 RPP14O95059 124 aaKnown RBP2.78□□□□□ -1.96
RNF4-211ENST00000509206 SOX14O95416 240 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 FADS2O95864 444 aaKnown RBP2.78□□□□□ -1.96
RNF4-211ENST00000509206 NPPAP01160 153 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 IGLV3-1P01715 115 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 APELAP0DMC3 54 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 MIFP14174 115 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 ATF1P18846 271 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 ALOX5APP20292 161 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 EDN2P20800 178 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 ARL3P36405 182 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 MAGEA2P43356 314 aa2.78□□□□□ -1.96
RNF4-211ENST00000509206 ZNF137PP52743 207 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms