RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 CT45A5P0DMU8 189 aa14.65□□□□□ -0.06
UBE3D-207ENST00000509102 CT45A7P0DMV0 189 aa14.65□□□□□ -0.06
UBE3D-207ENST00000509102 PLA2G7Q13093 441 aa14.65□□□□□ -0.06
UBE3D-207ENST00000509102 MOGAT2Q3SYC2 334 aa14.65□□□□□ -0.06
UBE3D-207ENST00000509102 FOXB2Q5VYV0 432 aa14.65□□□□□ -0.06
UBE3D-207ENST00000509102 MRPL41Q8IXM3 137 aaKnown RBP14.65□□□□□ -0.06
UBE3D-207ENST00000509102 LINC00482Q8N8I6 264 aa14.65□□□□□ -0.06
UBE3D-207ENST00000509102 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.65□□□□□ -0.06
UBE3D-207ENST00000509102 OR8U1Q8NH10 309 aa14.65□□□□□ -0.06
UBE3D-207ENST00000509102 RNF5Q99942 180 aa14.65□□□□□ -0.06
UBE3D-207ENST00000509102 PARP12Q9H0J9 701 aaKnown RBP14.65□□□□□ -0.06
UBE3D-207ENST00000509102 OR51J1Q9H342 316 aa14.65□□□□□ -0.06
UBE3D-207ENST00000509102 H0YJW9 148 aa14.64□□□□□ -0.07
UBE3D-207ENST00000509102 RAB27BO00194 218 aa14.64□□□□□ -0.07
UBE3D-207ENST00000509102 MFNGO00587 321 aa14.64□□□□□ -0.07
UBE3D-207ENST00000509102 NDUFA3O95167 84 aa14.64□□□□□ -0.07
UBE3D-207ENST00000509102 PRB2P02812 416 aaPredicted RBP14.64□□□□□ -0.07
UBE3D-207ENST00000509102 TFAP2AP05549 437 aa14.64□□□□□ -0.07
UBE3D-207ENST00000509102 CNTFRP26992 372 aa14.64□□□□□ -0.07
UBE3D-207ENST00000509102 CDX1P47902 265 aaPredicted RBP14.64□□□□□ -0.07
UBE3D-207ENST00000509102 GLDNQ6ZMI3 551 aaPredicted RBP14.64□□□□□ -0.07
UBE3D-207ENST00000509102 RNF152Q8N8N0 203 aa14.64□□□□□ -0.07
UBE3D-207ENST00000509102 OR5AN1Q8NGI8 311 aa14.64□□□□□ -0.07
UBE3D-207ENST00000509102 MRAPQ8TCY5 172 aa14.64□□□□□ -0.07
UBE3D-207ENST00000509102 RBMXL1Q96E39 390 aaKnown RBP14.64□□□□□ -0.07
UBE3D-207ENST00000509102 GINS4Q9BRT9 223 aa14.64□□□□□ -0.07
UBE3D-207ENST00000509102 DAPK2Q9UIK4 370 aa14.64□□□□□ -0.07
UBE3D-207ENST00000509102 RNF150Q9ULK6 438 aa14.64□□□□□ -0.07
UBE3D-207ENST00000509102 KCNK7Q9Y2U2 307 aa14.64□□□□□ -0.07
UBE3D-207ENST00000509102 RBM7Q9Y580 266 aaKnown RBP14.64□□□□□ -0.07
UBE3D-207ENST00000509102 A0A0B4J203 849 aa14.63□□□□□ -0.07
UBE3D-207ENST00000509102 SMIM30A4D0T7 59 aa14.63□□□□□ -0.07
UBE3D-207ENST00000509102 RRHO14718 337 aa14.63□□□□□ -0.07
UBE3D-207ENST00000509102 RAB25P57735 213 aa14.63□□□□□ -0.07
UBE3D-207ENST00000509102 CBX3Q13185 183 aa14.63□□□□□ -0.07
UBE3D-207ENST00000509102 KCTD21Q4G0X4 260 aa14.63□□□□□ -0.07
UBE3D-207ENST00000509102 RITA1Q96K30 269 aa14.63□□□□□ -0.07
UBE3D-207ENST00000509102 TSNAXQ99598 290 aaKnown RBP14.63□□□□□ -0.07
UBE3D-207ENST00000509102 CABLES2Q9BTV7 478 aa14.63□□□□□ -0.07
UBE3D-207ENST00000509102 ZMAT5Q9UDW3 170 aaKnown RBP14.63□□□□□ -0.07
UBE3D-207ENST00000509102 RRP15Q9Y3B9 282 aaKnown RBP14.63□□□□□ -0.07
UBE3D-207ENST00000509102 IGHV7-81A0A0B4J1V7 117 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 TRAV41A0A0B4J266 112 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 IGKV1-6A0A0C4DH72 117 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 M0R1X1 148 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 CCL24O00175 119 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 ATP6V0E1O15342 81 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 CFHR3Q02985 330 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 TMEM267Q0VDI3 215 aaPredicted RBP14.62□□□□□ -0.07
UBE3D-207ENST00000509102 NEDD8Q15843 81 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 SRSF7Q16629 238 aaKnown RBP eCLIP14.62□□□□□ -0.07
UBE3D-207ENST00000509102 ZNF660Q6AZW8 331 aaPredicted RBP14.62□□□□□ -0.07
UBE3D-207ENST00000509102 ETV3LQ6ZN32 361 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 C18orf65Q6ZTR6 163 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 NR2C2APQ86WQ0 139 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 PDPNQ86YL7 162 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 ABHD5Q8WTS1 349 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 FBXL15Q9H469 300 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 VCX3AQ9NNX9 186 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 AURKAIP1Q9NWT8 199 aaPredicted RBP14.62□□□□□ -0.07
UBE3D-207ENST00000509102 WSB1Q9Y6I7 421 aa14.62□□□□□ -0.07
UBE3D-207ENST00000509102 TRBV6-7A0A0A0MS04 114 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 LOC100506127A0A0U1RQW1 187 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 SPDEFO95238 335 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 OR8U9P0C7N5 309 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 GSTT2P0CG29 244 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 GSTT2BP0CG30 244 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 DTYMKP23919 212 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 PSMB8P28062 276 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 RPS16P62249 146 aaKnown RBP14.61□□□□□ -0.07
UBE3D-207ENST00000509102 PITPNAQ00169 270 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 IGSF11Q5DX21 431 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 SFXN4Q6P4A7 337 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 LCNL1Q6ZST4 164 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 DRAXINQ8NBI3 349 aaPredicted RBP14.61□□□□□ -0.07
UBE3D-207ENST00000509102 C4orf3Q8WVX3 66 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 FLYWCH2Q96CP2 140 aaKnown RBP14.61□□□□□ -0.07
UBE3D-207ENST00000509102 P2RX4Q99571 388 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 TOLLIPQ9H0E2 274 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 OR2D2Q9H210 308 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 OR51E2Q9H255 320 aa14.61□□□□□ -0.07
UBE3D-207ENST00000509102 CD36P16671 472 aa14.6□□□□□ -0.07
UBE3D-207ENST00000509102 CD40LGP29965 261 aa14.6□□□□□ -0.07
UBE3D-207ENST00000509102 SDC2P34741 201 aa14.6□□□□□ -0.07
UBE3D-207ENST00000509102 TAGLNQ01995 201 aaKnown RBP14.6□□□□□ -0.07
UBE3D-207ENST00000509102 ECSCRQ19T08 205 aa14.6□□□□□ -0.07
UBE3D-207ENST00000509102 TIMM50Q3ZCQ8 353 aa14.6□□□□□ -0.07
UBE3D-207ENST00000509102 CDNFQ49AH0 187 aa14.6□□□□□ -0.07
UBE3D-207ENST00000509102 Q6ZS49 121 aa14.6□□□□□ -0.07
UBE3D-207ENST00000509102 TCTEX1D1Q8N7M0 179 aa14.6□□□□□ -0.07
UBE3D-207ENST00000509102 OR5M8Q8NGP6 311 aa14.6□□□□□ -0.07
UBE3D-207ENST00000509102 MAFIPQ8WZ33 124 aa14.6□□□□□ -0.07
UBE3D-207ENST00000509102 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.6□□□□□ -0.07
UBE3D-207ENST00000509102 SLC35D1Q9NTN3 355 aa14.6□□□□□ -0.07
UBE3D-207ENST00000509102 METTL1Q9UBP6 276 aaKnown RBP14.6□□□□□ -0.07
UBE3D-207ENST00000509102 ZNF230Q9UIE0 474 aaPredicted RBP14.6□□□□□ -0.07
UBE3D-207ENST00000509102 G3V318 75 aa14.59□□□□□ -0.07
UBE3D-207ENST00000509102 CTXN2P0C2S0 81 aa14.59□□□□□ -0.07
UBE3D-207ENST00000509102 SCAND1P57086 179 aa14.59□□□□□ -0.07
UBE3D-207ENST00000509102 GNG2P59768 71 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms