RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 NDUFB3O43676 98 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 CLDN14O95500 239 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 TBX6O95947 436 aaPredicted RBP6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 GPR183P32249 361 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 CRYBA2P53672 197 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 OR10J3Q5JRS4 329 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 C6orf15Q6UXA7 325 aaPredicted RBP6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 NR2C2APQ86WQ0 139 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 CALHM1Q8IU99 346 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 SAXO1Q8IYX7 474 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 OR1L8Q8NGR8 309 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 MRPL32Q9BYC8 188 aaKnown RBP6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 TMEM140Q9NV12 185 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 TTC3P53804 2025 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 ADAMTSL3P82987 1691 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 TRAV38-1A0A0B4J264 116 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 MS4A18H0YCH9 400 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 K7N7A8 449 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 SERF1AO75920 110 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 IGHV2-70P01814 119 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 IGHMP01871 453 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 SEC11AP67812 179 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 MS4A18Q3C1V0 323 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 OR4X2Q8NGF9 303 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 LRRC29Q8WV35 223 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 SLC25A28Q96A46 364 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 SARAFQ96BY9 339 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 TMEM208Q9BTX3 173 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 MEGF9Q9H1U4 602 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 MAP1LC3AQ9H492 121 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 WBP1LQ9NX94 342 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 COL16A1Q07092 1604 aaPredicted RBP6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 COL24A1Q17RW2 1714 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 A0A1B0GWB2 263 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 A0A1W2PP11 408 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 TMEM189A5PLL7 270 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 ZNF716A6NP11 495 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 ATP5IP56385 69 aaPredicted RBP6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 HIST1H1AQ02539 215 aaPredicted RBP6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 UBE2V1Q13404 147 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 FGFRL1Q8N441 504 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 APOBEC4Q8WW27 367 aaKnown RBP6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 KCNK17Q96T54 332 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 GDF15Q99988 308 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 J3QR06 171 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 C8orf88P0DMB2 117 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 TM4SF4P48230 202 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 TDGF1P3P51864 188 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 FAM27BQ5VT28 67 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 OR51B2Q9Y5P1 312 aa6.32□□□□□ -1.4
UBE2D3-224ENST00000508474 TRAV30A0A087WSZ9 112 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 LOC389332A0A1B0GUA5 103 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 LMX1BO60663 402 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 IGKV1D-16P01601 117 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 GCHFRP30047 84 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 OTX1P32242 354 aaPredicted RBP6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 CKS2P33552 79 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 SRSF4Q08170 494 aaKnown RBP6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 MAJINQ3KP22 176 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 MOB3BQ86TA1 216 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 TTC9CQ8N5M4 171 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 ABHD14AQ9BUJ0 271 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 TM2D1Q9BX74 207 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 ZNF257Q9Y2Q1 563 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 NPIPB13A6NJU9 1138 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 A6NNC1 897 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 NPIPB4C9JG80 1138 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 F5H697 171 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 GDF9O60383 454 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 HYPMO75409 117 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 EMP1P54849 157 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 FXYD3Q14802 87 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 CST9Q5W186 159 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 MIC13Q5XKP0 118 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 ST20Q9HBF5 79 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 FBLN5Q9UBX5 448 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 HIGD1AQ9Y241 93 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 PTPRFP10586 1907 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 LMO7DNF2Z398 122 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 CA1P00915 261 aaPredicted RBP6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 CXCL10P02778 98 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 WNT5AP41221 380 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 CEACAM21Q3KPI0 293 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 CENPWQ5EE01 88 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 TCF24Q7RTU0 167 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 OR2Z1Q8NG97 314 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 OR1N2Q8NGR9 330 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 RASL11BQ9BPW5 248 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 LRRC61Q9BV99 259 aa6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 MARF1Q9Y4F3 1742 aaKnown RBP6.31□□□□□ -1.4
UBE2D3-224ENST00000508474 A0A1B0GW15 77 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 C1QTNF9BB2RNN3 333 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 TMEM262E9PQX1 116 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 SCTP09683 121 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 GABRG2P18507 467 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 CRYBB3P26998 211 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 HOXA4Q00056 320 aaPredicted RBP6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 AMMECR1LQ6DCA0 310 aa6.3□□□□□ -1.4
UBE2D3-224ENST00000508474 PRNTQ86SH4 94 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms