RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 VCX2Q9H322 139 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 PLAC1Q9HBJ0 212 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 G6PC2Q9NQR9 355 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 TXNL4BQ9NX01 149 aaKnown RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 ETV7Q9Y603 341 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 KPTNQ9Y664 436 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 SNURFLB1AK76 121 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 LDLRAD4O15165 306 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 CD5LO43866 347 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 LALBAP00709 142 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 MSMBP08118 114 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 MGPP08493 103 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 APELAP0DMC3 54 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 RRASP10301 218 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 VPREB1P12018 145 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 SLC25A4P12235 298 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 HSD17B1P14061 328 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 ALOX5APP20292 161 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 TAS2R60P59551 318 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 TSPO2Q5TGU0 170 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 CNIH2Q6PI25 160 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 DNM1P46Q6ZS02 220 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 FA2HQ7L5A8 372 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 LRRC75A-AS1Q8N1F1 130 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 ADAD2Q8NCV1 583 aaKnown RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 NEUROG1Q92886 237 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 ISOC1Q96CN7 298 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 ZNF714Q96N38 554 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 CCL13Q99616 98 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 OR51J1Q9H342 316 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 RCE1Q9Y256 329 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 LSM2Q9Y333 95 aaKnown RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 TLN2Q9Y4G6 2542 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 IGHV3-43A0A0B4J1X8 118 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 IGHV2OR16-5A0A0B4J2B6 119 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 PGPA6NDG6 321 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 MBD3L4A6NDZ8 208 aaPredicted RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 MBD3L3A6NE82 208 aaPredicted RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 MBD3L5A6NJ08 208 aaPredicted RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 C1orf196B1AJZ1 125 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 OR2F2O95006 317 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 SEMG1P04279 462 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 IGHV3-43DP0DP04 118 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 IAPPP10997 89 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 G6PCP35575 357 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 BTN1A1Q13410 526 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 PMVKQ15126 192 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 CD226Q15762 336 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 ADIRFQ15847 76 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 CBLL1Q75N03 491 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 FAM219AQ8IW50 185 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 OR13F1Q8NGS4 319 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 MBD3L2Q8NHZ7 208 aaPredicted RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 ARHGDIGQ99819 225 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 FOXC2Q99958 501 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 SLC25A21Q9BQT8 299 aaPredicted RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 THAP7Q9BT49 309 aaPredicted RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 TMEM106BQ9NUM4 274 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 AP5S1Q9NUS5 200 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 PSENENQ9NZ42 101 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 CLCF1Q9UBD9 225 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 PEMTQ9UBM1 199 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 ASB1Q9Y576 335 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 TMEM56-RWDD3S4R434 201 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 ARHGAP21Q5T5U3 1957 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 PRR14LQ5THK1 2151 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 LYNX1G3V0Z9 82 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 CHST1O43916 411 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 LYNX1P0DP58 116 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 SRMP19623 302 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 BCL3P20749 454 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 HTR1FP30939 366 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 MC5RP33032 325 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 OR3A1P47881 315 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 RPS25P62851 125 aaKnown RBP2.53□□□□□ -2.01
NEDD4-208ENST00000508342 FAM3AP98173 230 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 EGR3Q06889 387 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 SRSF7Q16629 238 aaKnown RBP eCLIP2.53□□□□□ -2.01
NEDD4-208ENST00000508342 LGALSLQ3ZCW2 172 aaPredicted RBP2.53□□□□□ -2.01
NEDD4-208ENST00000508342 SOHLH1Q5JUK2 328 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM268Q5VZI3 342 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 OR1L6Q8NGR2 347 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 FLVCR1-AS1Q8TAF5 88 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 DVL3Q92997 716 aaPredicted RBP2.53□□□□□ -2.01
NEDD4-208ENST00000508342 BPESC1Q9GZL8 116 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 C11orf54Q9H0W9 315 aaPredicted RBP2.53□□□□□ -2.01
NEDD4-208ENST00000508342 KLK11Q9UBX7 282 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 V9GYS6 101 aa2.53□□□□□ -2.01
NEDD4-208ENST00000508342 NAV2Q8IVL1 2488 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 H3BMH7 237 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 SSSCA1O60232 199 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 ZIC3O60481 467 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 UPK3AO75631 287 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 HIST1H1CP16403 213 aaKnown RBP2.52□□□□□ -2.01
NEDD4-208ENST00000508342 MGMTP16455 207 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 GATA3P23771 443 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 SLC6A1P30531 599 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 GATA4P43694 442 aa2.52□□□□□ -2.01
NEDD4-208ENST00000508342 DLX1P56177 255 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms