RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 MPZL2O60487 215 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 PMCHP20382 165 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 CPN2P22792 545 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 PSMA1P25786 263 aaKnown RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 CCT6AP40227 531 aaKnown RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 CD79BP40259 229 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 CRATP43155 626 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 RPS5P46782 204 aaKnown RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 STC1P52823 247 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 EMP1P54849 157 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 LINC00313P59037 77 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 TAS2R30P59541 319 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 TAS2R20P59543 309 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 GABARAPL2P60520 117 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 PSMC5P62195 406 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 LCN2P80188 198 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 PRDX1Q06830 199 aaKnown RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 LRRC74AQ0VAA2 488 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 XRCC4Q13426 336 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 PAFAH1B3Q15102 231 aaKnown RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 CDK10Q15131 360 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 MAPK14Q16539 360 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 TAL2Q16559 108 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 C12orf74Q32Q52 190 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 ACSM3Q53FZ2 586 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 TRMT12Q53H54 448 aaKnown RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 HENMT1Q5T8I9 393 aaKnown RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 PLCXD3Q63HM9 321 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 DUPD1Q68J44 220 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 LAMTOR1Q6IAA8 161 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 DRAM2Q6UX65 266 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 SCGB1D4Q6XE38 83 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 EIF3MQ7L2H7 374 aaKnown RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 MRPL21Q7Z2W9 205 aaKnown RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 SPATA12Q7Z6I5 190 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 ZGRF1Q86YA3 2104 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 ZBTB8OSQ8IWT0 167 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 FAM9BQ8IZU0 186 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 SLC22A24Q8N4F4 322 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 ATPAF2Q8N5M1 289 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 CLHC1Q8NHS4 586 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 DTD1Q8TEA8 209 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 ZNF418Q8TF45 676 aaPredicted RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 PPWD1Q96BP3 646 aaKnown RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 CENPNQ96H22 339 aaPredicted RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 TRNT1Q96Q11 434 aaKnown RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 GNB1LQ9BYB4 327 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 NKX6-2Q9C056 277 aaPredicted RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 EIF5A2Q9GZV4 153 aaKnown RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 CHST6Q9GZX3 395 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 GTSF1LQ9H1H1 148 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 METTL17Q9H7H0 456 aaPredicted RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 AUNIPQ9H7T9 357 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 SLC2A9Q9NRM0 540 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 RBM7Q9Y580 266 aaKnown RBP-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 SBF1O95248 1867 aa-0.42□□□□□ -2.48
CLOCK-207ENST00000508049 HSPG2P98160 4391 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 FREM3P0C091 2139 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 FLT4P35916 1363 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 KIF24Q5T7B8 1368 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 RAB3GAP2Q9H2M9 1393 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 SRRM2Q9UQ35 2752 aaKnown RBP-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 TRAV8-7A0A075B6U6 113 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 TRAV8-2A0A0B4J237 113 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 IRGMA1A4Y4 181 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 CENPXA8MT69 81 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 SEC14L6B5MCN3 397 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 ITGB1BP1O14713 200 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 KLRC4O43908 158 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 CIB2O75838 187 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 PSMG1O95456 288 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 SNAI1O95863 264 aaPredicted RBP-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 LGALS1P09382 135 aaKnown RBP-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 DEFA4P12838 97 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 CCL5P13501 91 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 PSMB8P28062 276 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 ALDH3A1P30838 453 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 HOXA6P31267 233 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 CCR2P41597 374 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 OR1E2P47887 323 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 PSMB3P49720 205 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 DAPP51397 102 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 TAS2R45P59539 299 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 TPI1P60174 286 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 TSPAN5P62079 268 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 ZNF846Q147U1 533 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 MIAQ16674 131 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 TBC1D28Q2M2D7 210 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 ULK3Q6PHR2 472 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 AMTNQ6UX39 209 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 FAM183BPQ6ZVS7 135 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 DHFR2Q86XF0 187 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 PLCZ1Q86YW0 608 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 MICU2Q8IYU8 434 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 TMEM86AQ8N2M4 240 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 TMEM75Q8N9X5 138 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 OR8B3Q8NGG8 313 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 OR5D18Q8NGL1 313 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 OR11L1Q8NGX0 322 aa-0.43□□□□□ -2.48
CLOCK-207ENST00000508049 RPS4Y2Q8TD47 263 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms