RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 DIRC2Q96SL1 478 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 DCAF16Q9NXF7 216 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 DLL3Q9NYJ7 618 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 MTCH1Q9NZJ7 389 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 TRAPPC2LQ9UL33 140 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 PPP1R3CQ9UQK1 317 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 CBY1Q9Y3M2 126 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 SEC16AO15027 2179 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 NCOA6Q14686 2063 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 TRAV24A0A0B4J272 114 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 A0A0U1RQK1 487 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 A0A1W2PPV4 95 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 TMEM30CPA0ZSE6 113 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF320A2RRD8 509 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 C5orf49A4QMS7 147 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 LRRC30A6NM36 301 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 FAM90A9PA6NNJ1 464 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF705FA8MVS1 300 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 SLC33A1O00400 549 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 HSPB6O14558 160 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 HS3ST1O14792 307 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 RAB29O14966 203 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 MLNRO43193 412 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 PAX4O43316 350 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 PAGE4O60829 102 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 SS18L1O75177 396 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 TRAPPC6AO75865 159 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 CLDN14O95500 239 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 IGKV1-5P01602 117 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 CELA3AP09093 270 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 LINC00614P0C842 121 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 PATE4P0C8F1 98 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF705DP0CH99 300 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF705BP0CI00 300 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 SELEP16581 610 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 EN2P19622 333 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 GZMHP20718 246 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 KITLGP21583 273 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 CCNOP22674 350 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 LTBRP36941 435 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 FOXL2P58012 376 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 RELQ04864 619 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 ARL16Q0P5N6 197 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 DAZAP2Q15038 168 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 P2RY6Q15077 328 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 DCAF10Q5QP82 559 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 FAM78BQ5VT40 261 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 GUSBP11Q6P575 273 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 TRAT1Q6PIZ9 186 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF497Q6ZNH5 498 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 Q6ZRM9 215 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 H2BFWTQ7Z2G1 175 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 YRDCQ86U90 279 aaKnown RBP4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 HAPLN4Q86UW8 402 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 FGFRL1Q8N441 504 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 CMTM2Q8TAZ6 248 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 DTD1Q8TEA8 209 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZCCHC14Q8WYQ9 949 aaKnown RBP4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 RDH5Q92781 318 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 GALMQ96C23 342 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 C20orf144Q9BQM9 153 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 NPCDR1Q9BY65 106 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 VSIRQ9H7M9 311 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 SLC25A22Q9H936 323 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 PROK2Q9HC23 129 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 MBNL3Q9NUK0 354 aaKnown RBP4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 ABI3Q9P2A4 366 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 WIPI2Q9Y4P8 454 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 PXMP4Q9Y6I8 212 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 LY96Q9Y6Y9 160 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 ADAMTS20P59510 1910 aa4.19□□□□□ -1.74
HMGB3P16-201ENST00000508037 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 A0A1W2PQM1 296 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 LNP1A1A4G5 178 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 OOEPA6NGQ2 149 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF891A8MT65 544 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 HMGB3O15347 200 aaKnown RBP4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 SYNGR1O43759 233 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 WDR1O75083 606 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 TNFSF13O75888 250 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 MMP23AO75900 390 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 CXorf1O96002 111 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 IGKV1-39P01597 117 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 MT-ND6P03923 174 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 IGKV1D-39P04432 117 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 UMODP07911 640 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 CD55P08174 381 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 JMJD7P0C870 316 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 ESDP10768 282 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 BTF3P20290 206 aaKnown RBP4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 IL3RAP26951 378 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 GDF1P27539 372 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 OPRK1P41145 380 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR3A1P47881 315 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 CYB561P49447 251 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 TDGF1P3P51864 188 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 SOX8P57073 446 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 YPEL3P61236 119 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 RPL15P61313 204 aaKnown RBP4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 SELENOTP62341 195 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms