RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 PRELID3BQ9Y3B1 194 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 SAA2-SAA4A0A096LPE2 208 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 IGKV1-6A0A0C4DH72 117 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 A6NDX4 124 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 NAP1L6A6NFF2 107 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 BET1O15155 118 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 HOXA3O43365 443 aaPredicted RBP6.81□□□□□ -1.32
PDGFC-205ENST00000506880 KCNAB3O43448 404 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 MOSP00540 346 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 PPYP01298 95 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 FCER2P06734 321 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 SAA2P0DJI9 122 aaPredicted RBP6.81□□□□□ -1.32
PDGFC-205ENST00000506880 HKR1P10072 659 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 CD40LGP29965 261 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 ZNF134P52741 427 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 HERV-K104P61576 105 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 CATR1Q13166 79 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 LSAMPQ13449 338 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 RTL8BQ17RB0 113 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 RUSC1-AS1Q66K80 236 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 ZNF660Q6AZW8 331 aaPredicted RBP6.81□□□□□ -1.32
PDGFC-205ENST00000506880 IL17RELQ6ZVW7 336 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 ODF3L1Q8IXM7 274 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 LYG1Q8N1E2 194 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 BVESQ8NE79 360 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 OR52L2PQ8NGH6 319 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 OSR1Q8TAX0 266 aaPredicted RBP6.81□□□□□ -1.32
PDGFC-205ENST00000506880 CFHR4Q92496 578 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 SNAPC3Q92966 411 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 MOB3AQ96BX8 217 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 ABHD1Q96SE0 405 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 TSNAXQ99598 290 aaKnown RBP6.81□□□□□ -1.32
PDGFC-205ENST00000506880 GON7Q9BXV9 100 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 SCP2D1Q9UJQ7 156 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 MOB4Q9Y3A3 225 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 WASHC3Q9Y3C0 194 aa6.81□□□□□ -1.32
PDGFC-205ENST00000506880 RBM7Q9Y580 266 aaKnown RBP6.81□□□□□ -1.32
PDGFC-205ENST00000506880 ANKRD20A5PA0PJZ0 165 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 TMEM89A2RUT3 159 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 FAM172BPA6NC97 362 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 DISC1C4P0D8 188 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 H3BUX3 64 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 TIMM23O14925 209 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 VENTXO95231 258 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 AKAIN1P0CW23 69 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 RPA2P15927 270 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 GNG10P50151 68 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 RND3P61587 244 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 TSPAN5P62079 268 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 IGSF11Q5DX21 431 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 FAM131AQ6UXB0 335 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 LHFPL4Q7Z7J7 247 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 SNX29P2Q8IUI4 249 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 SLC38A6Q8IZM9 456 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 BCL6BQ8N143 479 aaPredicted RBP6.8□□□□□ -1.32
PDGFC-205ENST00000506880 Q8N402 240 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 Q8N6K4 173 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 POC5Q8NA72 575 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 NPBQ8NG41 125 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 OR52I2Q8NH67 350 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 VSTM2AQ8TAG5 236 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 PIFOQ8TCI5 191 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 WFDC12Q8WWY7 111 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 ABHD14BQ96IU4 210 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 NABP2Q9BQ15 211 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 SLC25A21Q9BQT8 299 aaPredicted RBP6.8□□□□□ -1.32
PDGFC-205ENST00000506880 ZNF251Q9BRH9 671 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 DCUN1D5Q9BTE7 237 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 WDR12Q9GZL7 423 aaKnown RBP6.8□□□□□ -1.32
PDGFC-205ENST00000506880 PRSS22Q9GZN4 317 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 BEX1Q9HBH7 125 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 LIN7CQ9NUP9 197 aaKnown RBP6.8□□□□□ -1.32
PDGFC-205ENST00000506880 EHFQ9NZC4 300 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 ZNF230Q9UIE0 474 aaPredicted RBP6.8□□□□□ -1.32
PDGFC-205ENST00000506880 HILPDAQ9Y5L2 63 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 TNCP24821 2201 aa6.8□□□□□ -1.32
PDGFC-205ENST00000506880 IGHV3-43A0A0B4J1X8 118 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 TRAV39A0A0B4J263 110 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 CENPXA8MT69 81 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 GPR137BO60478 399 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 ATG12O94817 140 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 NDUFA3O95167 84 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 IGHV3-43DP0DP04 118 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 FCGR2CP31995 323 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 HRH1P35367 487 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 GNMTQ14749 295 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 LTC4SQ16873 150 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 LDLRAD2Q5SZI1 272 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 STEAP1BQ6NZ63 245 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 KCTD9Q7L273 389 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 LHFPL1Q86WI0 220 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 PRIMA1Q86XR5 153 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 LYSMD2Q8IV50 215 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 COMMD1Q8N668 190 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 TERB2Q8NHR7 220 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 SPATA3Q8NHX4 192 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 TMEM68Q96MH6 324 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 CHIAQ9BZP6 476 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 OR2D2Q9H210 308 aa6.79□□□□□ -1.32
PDGFC-205ENST00000506880 ESM1Q9NQ30 184 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms