RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 CTAG2O75638 210 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 CRTAPO75718 401 aaPredicted RBP1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 TGM6O95932 706 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 PAHP00439 452 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 IGHV3-23P01764 117 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 HLA-HP01893 362 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 HLA-DQB1P01920 261 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 IFNA6P05013 189 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 GLAP06280 429 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 EIF4EP06730 217 aaKnown RBP1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 CSF3P09919 207 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 TRAPPC2P0DI81 140 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 TRAPPC2BP0DI82 140 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 SLC2A1P11166 492 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 PSKH1P11801 424 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 PSMB1P20618 241 aaKnown RBP1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 COX5AP20674 150 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 ZP3P21754 424 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 SLC6A1P30531 599 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 PMELP40967 661 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 HNRNPA3P51991 378 aaKnown RBP1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 CAV3P56539 151 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 OR10A3P58181 314 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 TAS2R46P59540 309 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 TAS2R19P59542 299 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 TAS2R20P59543 309 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 RPS23P62266 143 aaKnown RBP1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 GNG3P63215 75 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 FAM3AP98173 230 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 CDK10Q15131 360 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 ZMYND11Q15326 602 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 GUSBP1Q15486 140 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 OR8B8Q15620 311 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF79Q15937 498 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 GABRA6Q16445 453 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 RSPO1Q2MKA7 263 aaPredicted RBP1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 CEACAM21Q3KPI0 293 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 SLC25A35Q3KQZ1 300 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 ACTBL2Q562R1 376 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 PLCXD3Q63HM9 321 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 TMEM42Q69YG0 159 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 PVRIGQ6DKI7 326 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 GLIPR1L1Q6UWM5 242 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 TFAP2EQ6VUC0 442 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 GDPD3Q7L5L3 318 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 BHLHA15Q7RTS1 189 aaPredicted RBP1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 LINC00596Q86U02 117 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 TMEM17Q86X19 198 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 Q8IYB0 196 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 CHST4Q8NCG5 386 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 DUSP18Q8NEJ0 188 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 PXT1Q8NFP0 134 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 OR4M1Q8NGD0 313 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 OR51D1Q8NGF3 324 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 OR51T1Q8NGJ9 327 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 OR13C9Q8NGT0 318 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 OR10R2Q8NGX6 335 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 OR8S1Q8NH09 359 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 OR56B4Q8NH76 319 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 AKR7LQ8NHP1 331 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 LGALS14Q8TCE9 139 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 SMIM4Q8WVI0 70 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 ASB13Q8WXK3 278 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 PIGCQ92535 297 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 CREB3L1Q96BA8 519 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 STARD4Q96DR4 205 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 FAM122AQ96E09 287 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 ADAT3Q96EY9 351 aaPredicted RBP1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 KIR2DL4Q99706 377 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 PRRT1Q99946 306 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 GAL3ST1Q99999 423 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 MICU1Q9BPX6 476 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 SLC25A21Q9BQT8 299 aaPredicted RBP1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 MARVELD1Q9BSK0 173 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 RTL8AQ9BWD3 113 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 TMEM59Q9BXS4 323 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 METTL9Q9H1A3 318 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 MIXL1Q9H2W2 232 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 FAIMQ9NVQ4 179 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 PLEKHJ1Q9NW61 149 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 B3GNT2Q9NY97 397 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 TAS2R4Q9NYW5 299 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 EHFQ9NZC4 300 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 IL36GQ9NZH8 169 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 MTFP1Q9UDX5 166 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 OR5V1Q9UGF6 321 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 SCP2D1Q9UJQ7 156 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 CLEC4AQ9UMR7 237 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 ING4Q9UNL4 249 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 TP53TG5Q9Y2B4 290 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF835Q9Y2P0 537 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 POLDIP2Q9Y2S7 368 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 NUBP2Q9Y5Y2 271 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 CACNG2Q9Y698 323 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 USP9XQ93008 2570 aaPredicted RBP1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 TDRD6O60522 2096 aaKnown RBP1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 CACNA1EQ15878 2313 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 PTPN13Q12923 2485 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 KIR2DS1A0A191URI9 304 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 A0A1B0GUH1 482 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms