RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 OR56B2PQ8NGI1 322 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 OR5P3Q8WZ94 311 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 SFRP2Q96HF1 295 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 RYDENQ9NUL5 291 aaKnown RBP14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 CRIM1Q9NZV1 1036 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 PPP1R3CQ9UQK1 317 aa14.45□□□□□ -0.1
SQSTM1-211ENST00000506690 PMS2P5A8MQ11 134 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 TRAPPC2LH3BP13 241 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 DEGS1O15121 323 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 LIFP15018 202 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 BATFQ16520 125 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 COLCA1Q6ZS62 124 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 ZNF114Q8NC26 417 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 HSPB9Q9BQS6 159 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 NPCDR1Q9BY65 106 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 ZDHHC11Q9H8X9 412 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 IGHV1OR15-9A0A0B4J2B8 117 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 RBFOX2O43251 390 aaKnown RBP eCLIP14.44□□□□□ -0.12e-7■■□□□ 11.7
SQSTM1-211ENST00000506690 EGR1P18146 543 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 RAC1P63000 192 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 VN1R17PQ8TDU5 208 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 DERL1Q9BUN8 251 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 HSPB7Q9UBY9 170 aa14.44□□□□□ -0.1
SQSTM1-211ENST00000506690 MYF5P13349 255 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 RAB7AP51149 207 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 TFF3Q07654 80 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 CEACAM21Q3KPI0 293 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 SYT13Q7L8C5 426 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 LINC00596Q86U02 117 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 MKXQ8IYA7 352 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 FGFRL1Q8N441 504 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 TSTD1Q8NFU3 115 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 IL1F10Q8WWZ1 152 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 PSMF1Q92530 271 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 PROK2Q9HC23 129 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 TNRC6BQ9UPQ9 1833 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 ASCC3Q8N3C0 2202 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 TRAV24A0A0B4J272 114 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 SERF1AO75920 110 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 NDUFB4O95168 129 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 CRYAAP02489 173 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 SERPINA7P05543 415 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 GLB1P16278 677 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 TFPI2P48307 235 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 MSMO1Q15800 293 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 CEACAM16Q2WEN9 425 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 CPEB3Q8NE35 698 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 OR1L1Q8NH94 360 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 PATZ1Q9HBE1 687 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 MSL2Q9HCI7 577 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 DNAJC4Q9NNZ3 241 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 TRIOO75962 3097 aa14.43□□□□□ -0.1
SQSTM1-211ENST00000506690 ZNF716A6NP11 495 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 KRASP01116 189 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 DEFA4P12838 97 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 ZNF16P17020 682 aaPredicted RBP14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 RAC3P60763 192 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 OR5AU1Q8NGC0 362 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 KCNIP2Q9NS61 270 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 PGPEP1LA6NFU8 196 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 DNPH1O43598 174 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 TCF21O43680 179 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 CBR3O75828 277 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 ATP5G3P48201 142 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 CDC34P49427 236 aaPredicted RBP14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 TRA2AQ13595 282 aaKnown RBP eCLIP14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 VWC2Q2TAL6 325 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 TMEM249Q2WGJ8 235 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 C11orf42Q8N5U0 333 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 RDH5Q92781 318 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 CHODLQ9H9P2 273 aa14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 TNRC6AQ8NDV7 1962 aaKnown RBP14.42□□□□□ -0.1
SQSTM1-211ENST00000506690 SYNGR1O43759 233 aa14.41□□□□□ -0.1
SQSTM1-211ENST00000506690 CCL3P10147 92 aa14.41□□□□□ -0.1
SQSTM1-211ENST00000506690 CRISP2P16562 243 aa14.41□□□□□ -0.1
SQSTM1-211ENST00000506690 CHRNB4P30926 498 aa14.41□□□□□ -0.1
SQSTM1-211ENST00000506690 AAED1Q7RTV5 226 aa14.41□□□□□ -0.1
SQSTM1-211ENST00000506690 OR5A2Q8NGI9 324 aa14.41□□□□□ -0.1
SQSTM1-211ENST00000506690 SLC35E1Q96K37 410 aa14.41□□□□□ -0.1
SQSTM1-211ENST00000506690 TRBV20OR9-2A0A075B6H5 130 aa14.41□□□□□ -0.1
SQSTM1-211ENST00000506690 MDFIC2A0A1B0GVS7 189 aa14.41□□□□□ -0.1
SQSTM1-211ENST00000506690 TRIP6Q15654 476 aaKnown RBP14.41□□□□□ -0.1
SQSTM1-211ENST00000506690 RIPPLY2Q5TAB7 128 aa14.41□□□□□ -0.1
SQSTM1-211ENST00000506690 C19orf25Q9UFG5 118 aaPredicted RBP14.41□□□□□ -0.1
SQSTM1-211ENST00000506690 WIPI2Q9Y4P8 454 aa14.41□□□□□ -0.1
SQSTM1-211ENST00000506690 F6UZH7 168 aa14.4□□□□□ -0.1
SQSTM1-211ENST00000506690 SCRG1O75711 98 aa14.4□□□□□ -0.1
SQSTM1-211ENST00000506690 CBLN1P23435 193 aa14.4□□□□□ -0.1
SQSTM1-211ENST00000506690 GNG10P50151 68 aa14.4□□□□□ -0.1
SQSTM1-211ENST00000506690 NXPH1P58417 271 aa14.4□□□□□ -0.1
SQSTM1-211ENST00000506690 ZNF709Q8N972 641 aa14.4□□□□□ -0.1
SQSTM1-211ENST00000506690 OR10P1Q8NGE3 313 aa14.4□□□□□ -0.1
SQSTM1-211ENST00000506690 OR4B1Q8NGF8 309 aa14.4□□□□□ -0.1
SQSTM1-211ENST00000506690 SGCZQ96LD1 299 aa14.4□□□□□ -0.1
SQSTM1-211ENST00000506690 TRIOBPQ9H2D6 2365 aa14.4□□□□□ -0.1
SQSTM1-211ENST00000506690 KITLGP21583 273 aa14.4□□□□□ -0.1
SQSTM1-211ENST00000506690 TIMP3P35625 211 aa14.4□□□□□ -0.1
SQSTM1-211ENST00000506690 CTRLP40313 264 aa14.4□□□□□ -0.1
SQSTM1-211ENST00000506690 OR6C1Q96RD1 312 aa14.4□□□□□ -0.1
SQSTM1-211ENST00000506690 DLL3Q9NYJ7 618 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms