RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 OR10G4Q8NGN3 311 aa6.4□□□□□ -1.38
PPARGC1A-204ENST00000506055 RFESDQ8TAC1 157 aa6.4□□□□□ -1.38
PPARGC1A-204ENST00000506055 CA5BP1Q8WTZ4 195 aa6.4□□□□□ -1.38
PPARGC1A-204ENST00000506055 HIST1H2BHQ93079 126 aa6.4□□□□□ -1.38
PPARGC1A-204ENST00000506055 LHX4Q969G2 390 aa6.4□□□□□ -1.38
PPARGC1A-204ENST00000506055 HIST1H2BNQ99877 126 aa6.4□□□□□ -1.38
PPARGC1A-204ENST00000506055 HIST1H2BMQ99879 126 aa6.4□□□□□ -1.38
PPARGC1A-204ENST00000506055 OR51M1Q9H341 326 aa6.4□□□□□ -1.38
PPARGC1A-204ENST00000506055 VAX2Q9UIW0 290 aa6.4□□□□□ -1.38
PPARGC1A-204ENST00000506055 LAMA5O15230 3695 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 OR5H1A6NKK0 313 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 C17orf98A8MV24 154 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 IQCF6A8MYZ5 107 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 MLNRO43193 412 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 S1PR2O95136 353 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 S100A2P29034 98 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 CDX1P47902 265 aaPredicted RBP6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 FABP6P51161 128 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 GFI1BQ5VTD9 330 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 MRGPRGQ86SM5 289 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 ZDHHC16Q969W1 377 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 PINX1Q96BK5 328 aaKnown RBP6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 PLPPR2Q96GM1 343 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 C5orf30Q96GV9 206 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 FAM210BQ96KR6 192 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 SSX3Q99909 188 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 MSL2Q9HCI7 577 aa6.4□□□□□ -1.39
PPARGC1A-204ENST00000506055 ODAMA1E959 279 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 OOEPA6NGQ2 149 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 LRRC30A6NM36 301 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 CLDN34H7C241 214 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 ZG16O60844 167 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 IGKV1D-33P01593 117 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 IGKV1-33P01594 117 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 S100PP25815 95 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 SSTR5P35346 364 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 CCL11P51671 97 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 SOX8P57073 446 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 MSMO1Q15800 293 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 GABRA6Q16445 453 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 LTC4SQ16873 150 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 PRAMEF6Q5VXH4 476 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 FAM214BQ7L5A3 538 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 TMEM178AQ8NBL3 297 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 ZDHHC11Q9H8X9 412 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 SLC25A22Q9H936 323 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 SDF2L1Q9HCN8 221 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 GAR1Q9NY12 217 aaKnown RBP6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 HSPB7Q9UBY9 170 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 SSUH2Q9Y2M2 353 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 CHD3Q12873 2000 aaKnown RBP6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 FAM90A26D6RGX4 464 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 J3QW42 95 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 TIMM8AO60220 97 aaPredicted RBP6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 PTBP3O95758 552 aaKnown RBP6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 CYB5R3P00387 301 aaPredicted RBP6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 MDKP21741 143 aaPredicted RBP6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 HOXC12P31275 282 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 BRWD1-AS2P59051 145 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 NKX6-1P78426 367 aaPredicted RBP6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 PNRC1Q12796 327 aaPredicted RBP6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 ADIRFQ15847 76 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 ALKBH2Q6NS38 261 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 TMEM14EPQ6UXP3 125 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 H2BFWTQ7Z2G1 175 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 C11orf53Q8IXP5 236 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 C1orf87Q8N0U7 546 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 EDARADDQ8WWZ3 215 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 RPUSD4Q96CM3 377 aaKnown RBP6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 COQ2Q96H96 371 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 P2RX4Q99571 388 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 SMIM7Q9BQ49 75 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 METRNQ9UJH8 293 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 GTF3C1Q12789 2109 aa6.39□□□□□ -1.39
PPARGC1A-204ENST00000506055 TRBV23-1A0A0A0MS06 115 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 TMEM210A6NLX4 147 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 IFNA1P01562 189 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 SOD3P08294 240 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 TRGC1P0CF51 173 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 DEFA4P12838 97 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 FGF7P21781 194 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 TNFSF10P50591 281 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 CD81P60033 236 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 MEF2BQ02080 365 aaPredicted RBP6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 CATR1Q13166 79 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 PYY3Q5JQD4 70 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 WDR25Q64LD2 544 aaPredicted RBP6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 SLC35E4Q6ICL7 350 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 ACSM6Q6P461 480 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 VWA1Q6PCB0 445 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 INO80CQ6PI98 192 aaPredicted RBP6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 Q6ZT83 130 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 NECAP1Q8NC96 275 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 OR10P1Q8NGE3 313 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 OR10G9Q8NGN4 311 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 OR10G7Q8NGN6 311 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 DTD1Q8TEA8 209 aa6.38□□□□□ -1.39
PPARGC1A-204ENST00000506055 ABHD5Q8WTS1 349 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms