RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 AQP4P55087 323 aa17.17■□□□□ 0.34
SUDS3P1-201ENST00000505831 RPS25P62851 125 aaKnown RBP17.17■□□□□ 0.34
SUDS3P1-201ENST00000505831 HLA-DRB3P79483 266 aa17.17■□□□□ 0.34
SUDS3P1-201ENST00000505831 TRAM1Q15629 374 aa17.17■□□□□ 0.34
SUDS3P1-201ENST00000505831 TCTEX1D1Q8N7M0 179 aa17.17■□□□□ 0.34
SUDS3P1-201ENST00000505831 EDARADDQ8WWZ3 215 aa17.17■□□□□ 0.34
SUDS3P1-201ENST00000505831 DCUN1D4Q92564 292 aa17.17■□□□□ 0.34
SUDS3P1-201ENST00000505831 PLGRKTQ9HBL7 147 aa17.17■□□□□ 0.34
SUDS3P1-201ENST00000505831 MGAT4AQ9UM21 535 aa17.17■□□□□ 0.34
SUDS3P1-201ENST00000505831 ZNF256Q9Y2P7 627 aaPredicted RBP17.17■□□□□ 0.34
SUDS3P1-201ENST00000505831 IGKV1-6A0A0C4DH72 117 aa17.16■□□□□ 0.34
SUDS3P1-201ENST00000505831 LDLRAD4O15165 306 aa17.16■□□□□ 0.34
SUDS3P1-201ENST00000505831 SNRPBP14678 240 aaKnown RBP17.16■□□□□ 0.34
SUDS3P1-201ENST00000505831 MLLT11Q13015 90 aaPredicted RBP17.16■□□□□ 0.34
SUDS3P1-201ENST00000505831 AKIRIN2Q53H80 203 aa17.16■□□□□ 0.34
SUDS3P1-201ENST00000505831 PLAC9Q5JTB6 97 aa17.16■□□□□ 0.34
SUDS3P1-201ENST00000505831 ARHGAP5-AS1Q96IT6 56 aa17.16■□□□□ 0.34
SUDS3P1-201ENST00000505831 TOLLIPQ9H0E2 274 aa17.16■□□□□ 0.34
SUDS3P1-201ENST00000505831 ALX4Q9H161 411 aaPredicted RBP17.16■□□□□ 0.34
SUDS3P1-201ENST00000505831 FOXA2Q9Y261 457 aaPredicted RBP17.16■□□□□ 0.34
SUDS3P1-201ENST00000505831 A0A1W2PN81 502 aa17.15■□□□□ 0.34
SUDS3P1-201ENST00000505831 ARL6IP5O75915 188 aa17.15■□□□□ 0.34
SUDS3P1-201ENST00000505831 GSTP1P09211 210 aaKnown RBP17.15■□□□□ 0.34
SUDS3P1-201ENST00000505831 PSMA1P25786 263 aaKnown RBP17.15■□□□□ 0.34
SUDS3P1-201ENST00000505831 CHRNA7P36544 502 aa17.15■□□□□ 0.34
SUDS3P1-201ENST00000505831 PSG5Q15238 335 aa17.15■□□□□ 0.34
SUDS3P1-201ENST00000505831 ECSCRQ19T08 205 aa17.15■□□□□ 0.34
SUDS3P1-201ENST00000505831 C2orf76Q3KRA6 126 aa17.15■□□□□ 0.34
SUDS3P1-201ENST00000505831 ZNF562Q6V9R5 426 aa17.15■□□□□ 0.34
SUDS3P1-201ENST00000505831 PECRQ9BY49 303 aa17.15■□□□□ 0.34
SUDS3P1-201ENST00000505831 C12orf4Q9NQ89 552 aa17.15■□□□□ 0.34
SUDS3P1-201ENST00000505831 GAB2Q9UQC2 676 aa17.15■□□□□ 0.34
SUDS3P1-201ENST00000505831 U3KQK5 164 aa17.15■□□□□ 0.34
SUDS3P1-201ENST00000505831 H7C2Y5 167 aa17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 OVOL1O14753 267 aa17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 RGS10O43665 173 aa17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 HSMCR30P0CW71 290 aa17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 VEGFCP49767 419 aa17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 CLDN12P56749 244 aa17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 LINC00205P59089 165 aa17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 FABP5Q01469 135 aa17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 TMEM267Q0VDI3 215 aaPredicted RBP17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 RAB11BQ15907 218 aa17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 ZNF429Q86V71 674 aa17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 ZNF383Q8NA42 475 aa17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 DRAXINQ8NBI3 349 aaPredicted RBP17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 CASTOR1Q8WTX7 329 aa17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 DLX4Q92988 240 aaPredicted RBP17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 FAM3DQ96BQ1 224 aa17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 RNF150Q9ULK6 438 aa17.14■□□□□ 0.33
SUDS3P1-201ENST00000505831 IGKV1-16P04430 117 aa17.13■□□□□ 0.33
SUDS3P1-201ENST00000505831 CRHBPP24387 322 aa17.13■□□□□ 0.33
SUDS3P1-201ENST00000505831 PPP1R27Q86WC6 154 aa17.13■□□□□ 0.33
SUDS3P1-201ENST00000505831 MGLLQ99685 303 aa17.13■□□□□ 0.33
SUDS3P1-201ENST00000505831 CMSS1Q9BQ75 279 aaKnown RBP17.13■□□□□ 0.33
SUDS3P1-201ENST00000505831 KCNK7Q9Y2U2 307 aa17.13■□□□□ 0.33
SUDS3P1-201ENST00000505831 TRDCB7Z8K6 153 aa17.12■□□□□ 0.33
SUDS3P1-201ENST00000505831 HSPA12AO43301 675 aa17.12■□□□□ 0.33
SUDS3P1-201ENST00000505831 LGALS1P09382 135 aaKnown RBP17.12■□□□□ 0.33
SUDS3P1-201ENST00000505831 CALRP27797 417 aaKnown RBP17.12■□□□□ 0.33
SUDS3P1-201ENST00000505831 PLA2G7Q13093 441 aa17.12■□□□□ 0.33
SUDS3P1-201ENST00000505831 PYHIN1Q6K0P9 492 aa17.12■□□□□ 0.33
SUDS3P1-201ENST00000505831 PRSS48Q7RTY5 328 aa17.12■□□□□ 0.33
SUDS3P1-201ENST00000505831 OR56B1Q8NGI3 324 aa17.12■□□□□ 0.33
SUDS3P1-201ENST00000505831 METTL1Q9UBP6 276 aaKnown RBP17.12■□□□□ 0.33
SUDS3P1-201ENST00000505831 V9GY05 133 aa17.12■□□□□ 0.33
SUDS3P1-201ENST00000505831 DNAH7Q8WXX0 4024 aa17.12■□□□□ 0.33
SUDS3P1-201ENST00000505831 LINC01619G3V211 115 aa17.11■□□□□ 0.33
SUDS3P1-201ENST00000505831 DENRO43583 198 aaKnown RBP17.11■□□□□ 0.33
SUDS3P1-201ENST00000505831 SLURP1P55000 103 aa17.11■□□□□ 0.33
SUDS3P1-201ENST00000505831 PLGLAQ15195 96 aa17.11■□□□□ 0.33
SUDS3P1-201ENST00000505831 ACTBL2Q562R1 376 aa17.11■□□□□ 0.33
SUDS3P1-201ENST00000505831 ACSM6Q6P461 480 aa17.11■□□□□ 0.33
SUDS3P1-201ENST00000505831 LFNGQ8NES3 379 aa17.11■□□□□ 0.33
SUDS3P1-201ENST00000505831 RHOVQ96L33 236 aa17.11■□□□□ 0.33
SUDS3P1-201ENST00000505831 FAM103A1Q9BTL3 118 aaKnown RBP17.11■□□□□ 0.33
SUDS3P1-201ENST00000505831 ACOT13Q9NPJ3 140 aa17.11■□□□□ 0.33
SUDS3P1-201ENST00000505831 RDH8Q9NYR8 311 aa17.11■□□□□ 0.33
SUDS3P1-201ENST00000505831 A3GALT2U3KPV4 340 aa17.11■□□□□ 0.33
SUDS3P1-201ENST00000505831 IGHV4OR15-8A0A075B7B6 117 aa17.1■□□□□ 0.33
SUDS3P1-201ENST00000505831 A0A087WW49 117 aa17.1■□□□□ 0.33
SUDS3P1-201ENST00000505831 TMEM272A0A1B0GTI8 110 aa17.1■□□□□ 0.33
SUDS3P1-201ENST00000505831 SPDEFO95238 335 aa17.1■□□□□ 0.33
SUDS3P1-201ENST00000505831 PSMD7P51665 324 aa17.1■□□□□ 0.33
SUDS3P1-201ENST00000505831 SSBP2P81877 361 aaPredicted RBP17.1■□□□□ 0.33
SUDS3P1-201ENST00000505831 UNQ5815/PRO19632Q6UWF5 114 aa17.1■□□□□ 0.33
SUDS3P1-201ENST00000505831 PDPNQ86YL7 162 aa17.1■□□□□ 0.33
SUDS3P1-201ENST00000505831 CLCC1Q96S66 551 aa17.1■□□□□ 0.33
SUDS3P1-201ENST00000505831 TSNAXQ99598 290 aaKnown RBP17.1■□□□□ 0.33
SUDS3P1-201ENST00000505831 ASCL2Q99929 193 aa17.1■□□□□ 0.33
SUDS3P1-201ENST00000505831 ZNF221Q9UK13 617 aa17.1■□□□□ 0.33
SUDS3P1-201ENST00000505831 RAB22AQ9UL26 194 aa17.1■□□□□ 0.33
SUDS3P1-201ENST00000505831 SMAD5-AS1Q9Y6J3 95 aa17.1■□□□□ 0.33
SUDS3P1-201ENST00000505831 CA2P00918 260 aa17.09■□□□□ 0.33
SUDS3P1-201ENST00000505831 HSPB1P04792 205 aaKnown RBP17.09■□□□□ 0.33
SUDS3P1-201ENST00000505831 TFAP2AP05549 437 aa17.09■□□□□ 0.33
SUDS3P1-201ENST00000505831 MAP2K4P45985 399 aa17.09■□□□□ 0.33
SUDS3P1-201ENST00000505831 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.09■□□□□ 0.33
SUDS3P1-201ENST00000505831 OR4A4PQ8NGN8 299 aa17.09■□□□□ 0.33
SUDS3P1-201ENST00000505831 ARPC1BO15143 372 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms